Ciona intestinalis (yellow sea squirt): 100175858
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Entry
100175858 CDS
T01056
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00020
Citrate cycle (TCA cycle)
cin00640
Propanoate metabolism
cin01100
Metabolic pathways
cin01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
100175858
00640 Propanoate metabolism
100175858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100175858
Enzymes [BR:
cin01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
100175858
6.2.1.5 succinate---CoA ligase (ADP-forming)
100175858
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100175858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-GeneID:
100175858
NCBI-ProteinID:
XP_002131576
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All DBs
Position
1:complement(7920664..7927795)
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AA seq
447 aa
AA seq
DB search
MSSLVRSLLREQHNIGKLVNASKITGVYAQAKRNLSIHEYLSLGLLKEAGIPTPNGDVAS
TPEEAYNIAKNLSTSDSVVKAQVLAGGRGKGHFTSGLQGGVKIVYSPDEVKEVASQMLGN
KLITKQTGQKGRICNKVLVVERKYVRREFYFAITMERGTKQFGPVLIGSAQGGMDIEAVA
SKTPEAILKEYVDINNGCTEEQAVNLAKRMGFTDSNCHQAADCILKMYKLFIAKDASLIE
INPMAEDSDGNVMCMDAKLNFDDNAAHRQKEIFNLRDWSQEDDRDAQAAKADINYIGLDG
NIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATADQVMEAFKLITSDENVNSILVN
IFGGIMRCDVIAQGIIQAAQQLDLKIPIIVRLQGTKVEDAKALIAQSQLKILTCDSLNEA
AKMVVKLSDIVGLAKEASIDVKFELPI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcattggtccgtagtcttcttcgagagcaacataacatcgggaaacttgttaac
gcatcgaagattactggtgtatatgctcaagctaaacgaaatctttccattcatgagtac
ctcagtcttggtttgctgaaagaagcaggaattccaactcctaatggggatgtagcatcc
acacctgaagaggcatacaacattgccaaaaacttaagcacttcagactctgtggtaaaa
gctcaagttcttgctggaggtcgtggtaaaggtcacttcaccagtggattgcagggtggt
gttaagattgtatattcccctgatgaggtaaaggaagttgcaagccaaatgcttggcaac
aaattaatcacaaaacaaactggtcagaagggcaggatatgcaacaaagttcttgtggtt
gagcgaaagtatgtaagacgggaattctactttgcaattactatggaacgtggaacgaaa
caatttggccctgtgttgattggtagtgcacagggaggcatggatattgaagctgtagct
tctaaaacacctgaagcaattttaaaagaatatgtcgatattaataatggctgtactgaa
gaacaagctgtaaaccttgccaagcgaatgggtttcaccgacagcaactgccaccaagct
gctgattgcattctaaaaatgtacaagctattcattgcgaaagatgcatctctgattgaa
attaatccgatggctgaagactctgatggcaatgtaatgtgcatggatgcgaagttaaac
tttgatgacaatgctgcacatcgacaaaaagagattttcaatttgagggattggagccag
gaagatgacagagacgctcaagcagcaaaagctgacattaattatatcggccttgatggt
aacatcggatgcttggtgaatggtgctgggctagccatggcaacgatggacattatcaaa
ctacatggaggaactccagctaacttcctggatgttggaggtggagcaactgcagatcaa
gtgatggaggcatttaaacttatcacatctgacgaaaatgtcaattcaatccttgtgaac
atatttggtggtattatgaggtgtgatgtgattgctcaaggcatcatacaagctgctcag
caacttgacctaaaaatccctatcattgtacgattacaaggtaccaaggttgaggatgca
aaagccctaatcgcgcaatcccaattaaaaattttgacatgcgacagtctcaatgaagct
gctaaaatggttgttaaactttctgacatagttggacttgcaaaagaagcttccattgac
gttaagtttgaacttcctatttag
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