KEGG   Ciona intestinalis (yellow sea squirt): 100175861
Entry
100175861         CDS       T01056                                 
Name
(RefSeq) signal recognition particle receptor subunit alpha-like
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03060  Protein export
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    100175861
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cin02044]
    100175861
Secretion system [BR:cin02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   100175861
SSDB
Motif
Pfam: SRP54 SRP-alpha_N SRP54_N MeaB CbiA AAA_19 nSTAND_NTPase5 NTPase_1 Fer4_NifH nSTAND3 AAA_30 VirC1 SRX
Other DBs
NCBI-GeneID: 100175861
NCBI-ProteinID: XP_002122258
Ensembl: ENSCING00000008954
LinkDB
Position
4:823574..830889
AA seq 639 aa
MLDFFSIFSKGGIVLWCYTFQGVKASFTEPINALIKTVLLQERGGTSHFTHGALQMQYKL
DNEFELIFVVGYQKVLTLLYVDKLITDVHRDFRDRYRQKLLDGSLSWITLNFSYDNQFSI
LRSNAEVKESKKVTTMRTFDKSEKSKKTIKSMTIDKNKDAKDAEIKKKTNSPKPEKVVKA
NVEAPAVQPSVPQPNNTLDPDVIARNREALAKRAAASKAKGKKAAPKKTGKSARVWQNGG
NAKDAESLDRSGNTNKDALTNGHSHDDNVTAEQKNWVNTSSKIQDLEIDEEEILEDEEEY
EDEDVEEDVEEQANTKKSSGGIFSMFRGLVGSKALTKEALQPVLNSMRDHLIGKNVAADI
AEKMCDSVANKLEGKMVGTFSTIASTVKQSLNDSLVLILTPKRRVDILRDVLEAQRAGKP
YVITFCGVNGVGKSTNLAKICFWLMENGFRVMIAACDTFRAGAVEQLRTHKTRLHTLHPP
SMHGGRDGVNLFEKGYGKDAAGIAMQAINAAREQRYDVVLVDTAGRMQDNEPLMRSLAKL
ITVNSPDLVLFVGEALVGNEAVDQLVKFNQALADYSNAENPRSIDGIVLTKFDTIDDKVG
AAISMTYTTGQPIVFVGTGQSYPDLRRLNAKAVVHALLK
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgttggattttttttcaatcttttctaaaggtggaatagtattatggtgttacaccttt
caaggtgtaaaagcaagcttcacagaaccaatcaatgctttaataaagaccgtattgcta
caggaaagaggtggtacgtcccacttcacacatggtgcgctacaaatgcaatacaaactg
gataatgagtttgaattaatatttgtggttggttaccagaaagtgttgactttgttgtac
gtagataaactgattactgacgtacacagagattttcgtgatagatatcgtcaaaaactt
ttggatggatctctctcatggattactcttaattttagctatgataatcaattcagtata
ctaagaagcaatgctgaggtaaaggaatcaaaaaaagtgacaaccatgagaacttttgac
aaatcagaaaaatcaaagaaaaccatcaagtcgatgaccattgataagaataaggatgca
aaggatgcagaaataaaaaagaaaacaaacagtccaaaaccggaaaaagttgtaaaagca
aacgttgaagcaccagcagttcaaccaagtgttccacagccaaacaacacattagatcct
gatgtaattgctcgcaacagagaagcattagctaaacgtgcagctgcatcaaaagcaaag
ggtaaaaaagctgctccaaagaaaactggaaaatctgcacgagtttggcagaatggtgga
aatgctaaagatgcagaatctcttgatagaagtgggaatactaataaagatgctctaact
aatggtcacagtcatgatgataatgtaacagctgaacagaaaaattgggtaaacacatcg
agcaaaatccaagatttggaaattgatgaagaagaaatattggaggacgaggaagaatat
gaggatgaagatgtggaggaagacgtggaagaacaagctaatacaaagaaatcatcagga
gggattttcagcatgtttcgtggtctcgttggttctaaagctctaaccaaggaagctttg
cagccggtgcttaattctatgagagatcatcttattggcaaaaatgtggcagctgatatt
gcagagaaaatgtgtgattctgttgccaataaacttgaggggaaaatggttggaactttc
agtaccattgcttccactgttaaacaaagtctaaacgattcacttgtgttgatcctcaca
ccaaagcgccgtgttgatatccttcgtgatgtgttggaggctcaacgtgctggcaaacca
tacgtgataactttctgtggtgtcaatggtgttgggaagtccaccaaccttgctaaaatt
tgtttctggttaatggagaatggctttcgtgtgatgatagcagcttgtgacacgtttcgt
gctggagcagttgaacaactgcgaacccacaagacgcgtctccatacacttcacccacca
tccatgcatgggggtagggatggtgtgaacttgtttgagaaaggatatggtaaagatgct
gcaggaatcgctatgcaagccattaatgcagcccgtgaacagcgttatgacgttgtattg
gttgacacagctggtcgtatgcaggacaatgaacctcttatgaggtcactagcaaagctc
atcactgttaattcacccgatctggtattgtttgttggcgaggcattagttggtaacgag
gctgttgatcaacttgttaagttcaaccaagccttagctgattattcaaacgctgagaac
ccacgaagcattgatggtatcgtgcttactaagtttgacaccattgatgataaagttgga
gcagcaatttcaatgacatatacaactggtcaaccaatcgtattcgtcggtacagggcag
tcttatccggatctccgtcgtttgaacgccaaagctgtcgtccatgcactacttaagtaa

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