Ciona intestinalis (yellow sea squirt): 100175876
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Entry
100175876 CDS
T01056
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 1 isoform X2
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100175876
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100175876
Protein phosphatases and associated proteins [BR:
cin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100175876
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100175876
Intermediate filaments
Intermediate filament-binding proteins
100175876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
100175876
NCBI-ProteinID:
XP_002125968
LinkDB
All DBs
Position
13:777532..793019
Genome browser
AA seq
1326 aa
AA seq
DB search
MRQFDLPDSDAHYDVEKAKIRSSLAWLLGVVRIQHPTCNVEKIFNENGEVMRDVQEFLIS
GWPYRQCIRMIFDTNIQQNGFDAVIQALCRHEFYILKSDDPVLTSTQLSNYPPNMNSHIQ
LIDMMMFAASSKMWISTETLVKSIKKFSSFYASRELPGNTEEAVVLWLSKVVTKVQHLEQ
TTEPHKKPSDPCMVYPIVTSKLEDICDSAVIALVLHYYCPTHIPINDIVLKEDTSLADAL
HNLTMSLQFAFDEVLTQGNPPFLTPDDFISCHDDLQPNFIAFFAQLFYCLEIAPKSDKIS
PRGHEVKTSEKMTIAMKSDAPHISTASTSSVSSQNSSILSKIPNISSLISDATERSFLPP
EEKLIGKHCTPTTNLLTTSSQSDSDLHIPYMGIPQKPLLPRRHQEDRPHSTNPRFVTPIY
HGVIRKSSSLHNILNGELSLPTATPPSAWNQYNDTQPRRQWNHPSMTQQSLLSKVEMDGE
IDQLLSDRSVTSSMGAGDSRDVDISWKGFTSGKPPPTPGGRSARINDGDLTIETVRTNDF
RSPVSTSRGFYARPLLSQNSYNDSASELTSVSTITGSASSTTNSYKPQNNFSANVSQVSP
EKSTLTEQNLKFAQNSYTVHSGAFQSMESARAAGYPVIGEPSHVIPSHESYHDMKTSQND
HTNSHMKGSVSCESGMTSSMMTSSKNKLPRNTSLAEVASQTEKPCNSISVQMDPLETKLN
EAFRLFNQLKMEVENMKRRNHRSDNVSSNLSQLKQAKYCHQSKHLSAGVNKEESSSDYSS
KSPSPASTNREQPQQQQQALPLKSHLTRIHENFPESADESTLCEGSTVALVQRKLDQLQL
SVERERTKQRVSDLDREVEELHKELNEIKKSSLHLNSSSEEPKHFSASPVKQNALNSSFS
DPGKPPVITIVEANSPVIGQGLHQSGRSVGGSENKAQQRPQVETRRSLFSNNGAEENKEN
SEGSLEKHLQVTKPAHEISVTYDSFSCRLESSSSCKSTPAKSAPASPNADEIQTTLNESD
RKGGLGFTILEEKSPANTLAKKKEKFLLSRLKKEEEMRKKQIEREAELENKKREAREQQE
AIQQKKMDEKMKRDRRLNDFKMRKKQEEEAANQRLGIIGSTSTKKHTNKVKTNHHIPSDQ
AESIQNLLNFDAPTNYAYTDLNSAKNTGRSGAETYIIEDTESVGSGGGSGSGSEYTGPKL
FKKLSSKSNRALIHNALCHCCLPGKVNESARNKILQDLEQTDARHLMVLFRDNKCQYRAL
YSYNPETEKLIRITGNGPHHITPTMIESLFKYNSGRRSFTRVPSKTLSVSIDAITIKQSL
WQASKK
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagtttgaccttccagattctgatgcacattacgacgtcgaaaaagcgaagatt
cgaagctcactggcttggttattaggggtagttcgtatacaacacccaacatgtaatgtg
gaaaagattttcaatgaaaatggagaagttatgcgagatgtacaggagtttcttatcagt
ggttggccatatagacaatgtatacgaatgatatttgataccaatatacaacagaatggt
tttgatgccgtcatacaagctttatgcagacatgagttttatattctaaagtcagatgac
cctgtattgacatcaacacaactatcaaactacccgcctaatatgaactcccacatccaa
ctcattgatatgatgatgtttgctgcttcaagtaaaatgtggataagcactgagactctt
gtcaagtcaataaagaagttctcaagtttttatgcttcaagagaattacctggcaacact
gaagaagctgtagtcctgtggttaagcaaggtagtaaccaaagtccagcatctcgagcag
accactgaaccacataagaagccctctgatccatgcatggtgtacccaatcgttacttct
aagttagaagatatatgcgacagtgcagttattgcacttgtattgcattattattgccca
acacatatccctataaatgatattgtactaaaagaagacacatcgttggctgatgctcta
cataatttaactatgtctcttcaatttgcttttgacgaggttctaactcagggaaacccc
ccatttctaacacctgatgacttcattagttgccatgacgacttacaaccaaattttatc
gcgttttttgcacagttgttttactgtcttgaaattgctccaaaaagcgataaaatttca
ccaagaggtcatgaggtaaaaacatctgaaaaaatgacaattgctatgaaatcagatgca
ccacatatttctacagcaagcacttctagtgtttccagtcaaaactccagcattctttcc
aaaattcccaacatttcctctttaatcagtgatgccacagaaagaagttttttaccgcct
gaagaaaagttaattgggaaacactgtacccctaccaccaacttactgacaacgtcatca
caaagtgattctgaccttcatattccatatatgggaattccacaaaaacctttgttaccg
cggagacatcaagaagatcgacctcattccacgaatccaaggtttgtgacccccatatac
catggtgtaatacgcaagtcatcttcattacataatatattaaatggtgaattatctctc
cctactgctacacctccttctgcctggaaccaatataatgacacacaaccaagaagacaa
tggaatcatccaagcatgacacaacaaagtttgttatctaaagttgagatggacggtgag
atagatcaactactgagtgacaggagtgttactagcagcatgggggctggggattcccgt
gacgttgacatatcctggaaaggtttcacctctgggaaacccccaccaaccccagggggt
cgttccgctcgaataaacgacggtgacctcacaatcgagacggtacgcaccaacgatttc
cgctcaccagtttccacgagtcgtggtttctatgcacgtcctctgctgagtcagaattcc
tacaatgactcagcatcagagttaacgagcgtctcaacaatcaccggatccgcttcatcg
accacgaactcatacaaacctcaaaacaatttcagtgcaaatgtcagccaagtctcacca
gaaaaatccacgcttactgaacaaaatctcaaattcgctcaaaacagttacactgtacat
agtggtgcatttcaatcgatggaatctgcgcgagcagctggttatcccgtgattggtgaa
ccttctcatgtgataccatcacatgagagctatcatgatatgaaaacttcacaaaatgat
catacaaattctcatatgaaaggatcagtatcatgtgagtctggtatgacatcatcaatg
atgacatcatcaaagaataaattaccacgaaacacaagtttggctgaagttgcatcacaa
acagagaaaccatgtaattctataagtgttcaaatggatccccttgaaactaaattaaat
gaagcattcagactgtttaatcaattgaaaatggaagtagaaaatatgaaaagaagaaat
catcgttctgataatgtctcttctaacctgagtcaattgaaacaagccaaatattgccac
caatccaaacacctttcagcaggggtaaacaaagaggaaagtagttcagattattcatcc
aaaagtccaagccctgcttctacaaatagagagcaaccacaacaacaacaacaagctctt
ccattaaaatctcacttaacgagaatccacgaaaatttccccgagtcagcagatgagtcg
acactctgcgagggaagcactgtcgccctcgtgcagcgaaaactcgaccagctacaactc
tccgtcgagcgcgaacgaacgaaacaacgagtcagcgacctcgatcgggaagtggaagaa
ttacacaaggaattaaacgagatcaaaaagtcttctcttcatcttaattcatcctctgaa
gagccgaaacatttttccgcatcaccagtcaagcagaacgctttaaacagttctttctcg
gaccccggaaaacccccagttattacgatcgttgaggctaactctcctgtgattggacaa
ggtttgcaccaatcaggacgctccgttgggggcagcgaaaataaagctcaacagcgccct
caagtggagacaagaaggtcgttgttttcgaacaatggcgcagaagaaaataaggaaaat
agcgaagggtctctggagaagcatttacaagtcacaaagccagcgcacgaaatctcggtg
acatacgattcattttcgtgtcgattggaatcttcctcttcatgtaaatcaacccctgct
aaatctgcccctgctagtccaaatgctgatgaaattcaaacaacccttaatgaaagcgac
agaaaaggaggtcttggttttaccatcttggaggagaagagtccagcaaacacacttgca
aagaaaaaagagaagtttctgctaagcaggctaaagaaagaagaggagatgagaaaaaag
caaattgagagagaggctgagttggaaaacaaaaaaagggaggcaagggagcaacaagaa
gcgatccagcagaagaaaatggatgaaaagatgaaacgagatcgaaggttaaatgacttc
aagatgagaaagaaacaagaagaagaggcggccaatcagagattaggaatcattgggtct
acttctactaaaaaacatacgaacaaagtaaagaccaatcatcatataccttcggaccaa
gctgaatcaattcaaaacctacttaattttgatgcaccaactaattacgcatacactgat
ctcaactccgcaaagaacactggacgctctggtgctgagacttatattatagaagacaca
gagtctgttgggtctgggggaggttctggtagtggctcagaatatacaggtccaaagttg
ttcaagaaattaagttcgaaatcgaatcgtgcgctcatccataacgctctatgtcattgt
tgcttgccagggaaagtgaacgagtccgctcggaataaaatattacaagacttggagcag
actgatgcaaggcacttaatggttttatttagagataataaatgtcagtacagagcactg
tatagctacaatccagagactgaaaaacttatcagaattactggaaatggtccccaccat
attacgccaactatgattgagtctttattcaaatacaactctggtcggcgttccttcact
cgtgtaccttctaaaacactatctgttagcatagatgctattaccatcaagcagtcactt
tggcaagcatctaaaaaataa
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