Ciona intestinalis (yellow sea squirt): 100175879 Help Entry 100175879         CDS       T01056                                  Name (RefSeq) cullin-4A isoform X1   KO K10609   cullin 4 Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03420   Nucleotide excision repair cin04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100175879   09124 Replication and repair    03420 Nucleotide excision repair     100175879  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cin04121]     100175879    03400 DNA repair and recombination proteins [BR:cin03400]     100175879   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cin04147]     100175879 Ubiquitin system [BR:cin04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Cullin      100175879 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       100175879     TCR (transcription coupled repair) factors      Cul4-CSA complex       100175879 Exosome [BR:cin04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    100175879 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cullin Cullin_Nedd8 ForC_N Motif Other DBs NCBI-GeneID:  100175879 NCBI-ProteinID:  XP_018670891 Ensembl:  ENSCING00000001234 LinkDB All DBs Position Unknown AA seq 752 aa AA seqDB search MSDPTAMDVSNSPVAMKTIQTSMTIGSKASSAKKITIKNFKDKPVLPDNYERDTWKKLED AVSAIHRSSFIRYSLEELYKAVENLCSHKIAKNLYGQLKDVCESHIRKQVHIFDDGVSGE SFLRKLEQQWQDHCQQTIMIRCIFLVLDRTYVLQNSMLPSLWDLGLDLFRENVLSREHVR ERCFFGLLNLIKRERSGDTIDRCLLRNLLSMLNDLHIYHTMFEKRFLHETEESYSIEGSA KRSSMEVHEYLIHTERRISEERDLCLACMDHSTLKPLTLCVEEQLISKHTEALLSKGLSH LIVENRIDDLMRLYKLFSAVKDGIQSLCTHFNKHVKNVASLIVLDVSNDHTMVQDLLDLK EKLSNIVTKCFSKDLKFVEALREAFESSINKRQNKPAELIAKYVDQRMKSGNKEATEVEL DRTLDQIMMLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGMFTG KLEGMFNDISHSKELMAQYRQHVTTKKEGKVPNIDMSVNILTMGYWPTYPPMEVQLPSYL VKLQDSFKDFYLSKHSGRKLSFRASLGHCVLKSKFKNGNKELQVSQFQALVLLLYNEATC FSFLQIKSDTQIEDSELRRTLQSLACGKARILTKSPKGKDVNDGDNFNLNTEFKHKLIRI KINQIQLKESVEENTDTTERVFQDRQYQIDAAIVRTMKTRKTLSHQLLLTELYDQLKFPL KATDIKKRIESLIERDYMERDKDNTTQYHYMA NT seq 2259 nt NT seq  +upstreamnt  +downstreamnt atgagtgatccaacagcaatggatgtttccaattctcctgtagccatgaaaaccatacaa accagcatgactattggttcaaaagccagcagtgcaaaaaagatcacaattaaaaacttc aaagataaaccagtgttaccggacaattatgaaagagatacctggaaaaaacttgaagat gctgtttcggctattcacagatcctcatttatacgatacagccttgaagaattatacaaa gcagttgaaaatctatgttctcataagatagcaaaaaatctctatggtcagttgaaggat gtatgcgagtctcacatcaggaagcaggttcatatatttgatgatggtgtctcaggtgaa agctttcttcgaaaacttgaacaacagtggcaagatcactgccagcaaacgattatgatc cgttgcatattcctggtgcttgatcgaacatatgttcttcaaaattccatgcttccttca ttatgggatcttggccttgatctttttcgtgaaaatgtgttaagtcgagaacatgttcga gagcgttgtttttttggattgcttaatttaataaagcgagaaaggtctggagacacaatt gatcgatgtttactccgcaatcttctatctatgcttaatgatctccatatttatcacaca atgtttgagaagcgttttcttcatgaaacagaagagagttattcaattgaagggtccgca aaacgatcttcaatggaagtacacgagtatctgattcacacagagagaagaatatctgag gagagagatctgtgccttgcttgcatggatcattcaacattgaaacccctgacactgtgt gttgaagagcaactaatatccaagcatacagaagcactcttaagcaaagggttaagtcac ctcatagtggaaaatcgcattgatgatttaatgagattgtataaactgttctcagcagtg aaggatgggatacaatcattatgtactcactttaataaacatgtcaagaatgttgcctca cttattgtgttggatgtcagcaatgaccacaccatggtacaagatcttcttgatttgaaa gaaaaactttcaaacattgtgacaaaatgtttttcgaaagatttaaagtttgtagaggct ttaagggaagcatttgaatcttcaatcaataaaagacagaataaaccagctgaactaatt gctaaatatgtggatcaaagaatgaaatctggtaataaagaagcgactgaagtggaactt gaccgcacattggatcagatcatgatgttgttcagatttatacatggaaaagatgtgttt gaagctttctataagaaagatttagcaaagcgacttttggttggaaagagtgcatctgtt gatgcagaaaagtctatgttgtcaaaattgaagcaagaatgtggtggaatgtttactgga aaacttgaagggatgtttaatgacatctcgcattcaaaggagctaatggcacagtataga cagcacgtcactacaaagaaggaaggtaaagttcctaacattgatatgagtgtgaacata ttaacaatgggatactggccaacctatccacccatggaagtacaacttccctcatatctt gtcaaacttcaagatagcttcaaagatttttacttaagcaagcactctgggaggaagttg tctttcagggcatcgctcggccattgtgttcttaaaagcaaattcaaaaatggtaacaag gaattacaagtttcacagttccaggcgttggttcttcttctgtacaatgaagcaacatgc ttttctttcttacaaattaaatctgacacacagattgaagattctgaattaagaagaaca ttacaatcacttgcgtgtggtaaagcaagaattttaacaaagtctccaaaaggcaaagat gtgaatgatggtgataactttaatctaaacactgagtttaaacacaagctgatccgaatt aaaataaatcaaatacagctaaaagagtcggttgaagaaaatacagacactactgagcgt gtgtttcaagatcggcagtaccaaattgatgctgccattgtccgaacaatgaaaactcgc aaaacattatcccatcaactcctacttacagaactatatgaccaactgaaattcccacta aaagcaacagacattaaaaaaagaatcgaaagtttaattgaacgggattatatggagaga gacaaggataacacaacgcagtaccactatatggcataa

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