Ciona intestinalis (yellow sea squirt): 100175904
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Entry
100175904 CDS
T01056
Name
(RefSeq) centrosomal protein of 170 kDa-like isoform X1
KO
K16463
centrosomal protein CEP170
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100175904
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100175904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
Yop-YscD_cpl
CEP170_C
Motif
Other DBs
NCBI-GeneID:
100175904
NCBI-ProteinID:
XP_009861316
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MSWYLDGSDESVHRLPNEMLFIGRQDCELILKSKSVDKQHAVMNYDIIQQAFRIKDLGSL
NGTFVNETRLPEQVYITMKEGDVIRFGYDTQTFIISKKSRTHREKKSDISNHLLKKPKKQ
SSTSLSTTTSSSSESTEKAPSTPSKKSEQYYFEIPTKDTKSIRSAKTDDELDKIPTKDKT
NNTPPKPSPASFTIDIKGNQQVVNGVKNLQHYASLRKSKQTNPQESKETSNSVDKWFALN
KPNRGLDVTPKKLNNSESDKKAKMSKSNSKESISSRKISQTSAVAPMLSASPQRPNKTRG
TNSATHSLRSSGASKNKSVLSSVEQGKDKLCKEGDNHSKSEGKKSHKSSSSSSSSSSSSS
SSSSSSSKPSHTGTYTIEGDKEPKKTTGDLEQIGGAGTDATELRTNWVNEWVNQHQIPTH
PINTQPQPTDSPDEDMSRSGSEGHRVRRSLPAIPHNAVQAARAAAARSRKDSNSSTSSND
KSKAFSQQDDDFNADVSQQHLVSQTYADEENELLIKPIPSKKSSTKVTPVDNNTTDDVGP
PLVDIVRNFKETSGNTRPSRPRRPLSGKTPKESSPSSRESSTERIPPLLRSNSFTKEKPS
GVVPDSEIPDATCKISEVPPLIRSNSFSKPHPGISEELIPRISAESDSSSVSEVELQDLS
TKVLPSSTIPSHQFDDSSVVSLADGHSDDKWKRPSPRRALSERIKTSKGEPLSARLRLDQ
SKSNKSLAQRAKKTSPQLSRRLSSDTLSTKAKSRSSTPSSTSATTASNPTVSNRSPQTSR
GKKQDFTRRSLGSQTSSTTLSSDTECLRQNNRRSLGGVTRTNSNSDCESSLRLTRTTLLR
QNKAKDSDKNRPRQAETTSTSTTQQTTDKKKNKITSRSSMERLNALARPPARRLSRCSET
ESSDNEGSHNLRSTRKRGTTTPVSRSRRQSRGSVASTTETDGSSALATQRTTTSLGARIV
RKSRTPDNRLTRSGSLDRATYRSRKFESRRKSTTPHVYSDCVSTSESEYDGQLDSNNNMP
TSASITTDTTDDTYTYNRSPPDGEMSDEIARASHDLARDLRILTSKPLDDLDSTLTSSTM
MTSSSVITGASEVDSLDISVQPTMVIPSPPAVKTDAKGQRKTWSNGGALDALMLSNVCAL
TERLCAVADSLTGKIGYLHGRSSPYEVTRSKVPLLQQTSSQEMALVVNNLRHVEMQLTRA
DDIVDPDKKLQDLLRP
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtacttggatggcagcgatgaatctgttcatcgtttgccgaacgaaatgtta
tttattggaagacaggattgtgaattaatactgaagtcgaaaagtgtagacaagcaacat
gcagtaatgaactatgacatcatacaacaagcattcagaatcaaagatcttggaagtctc
aatgggacctttgtcaacgaaacaaggttacctgagcaagtgtacatcacaatgaaggag
ggagacgtcatacgattcggttacgatactcaaaccttcatcatttcaaagaaatcaaga
acgcaccgcgagaagaagtctgatatctccaatcatttattgaagaaaccaaaaaagcaa
tcttcaacatctttgtcaaccactacctcttcttcatcagaatctacagagaaggcccca
tccaccccttccaagaaatctgaacaatattactttgagataccaaccaaagacacaaag
tcaataagaagtgcgaaaaccgatgatgaattggataaaataccaacaaaagataaaacg
aataatacgccaccgaaaccaagcccagcatcttttactattgatataaaaggcaaccaa
caagttgtgaatggagtaaagaaccttcaacattacgcttcgttacggaaatcaaaacaa
accaacccccaagaatcaaaggaaacctccaactcagtggataaatggtttgctttgaat
aaaccaaaccgtggattggatgtcacgccgaaaaaactaaacaactcagagtctgataaa
aaagcaaaaatgtcaaaatcaaacagtaaagaaagcatcagttccagaaaaatctctcaa
acatcagcagtggcccctatgttaagtgcatctcctcaaagaccaaacaaaacacgagga
acaaactcagcaacccacagtttaagatcaagcggggcgagcaaaaataaaagtgtcctc
tcatctgtggaacaaggaaaggataaactatgcaaagaaggagataaccattcaaaatct
gaggggaaaaagtctcacaaaagcagttcatcctcaagcagtagcagcagcagcagcagt
agcagtagcagttcatcttcaaaaccaagccacactgggacttataccatagagggcgac
aaagagccaaagaaaacaacaggagatttagaacagattggtggggcgggaacggacgct
actgagttacgaacaaattgggtgaatgaatgggtgaatcaacaccagataccaactcat
ccaatcaacacacaaccacaaccgaccgattctccagatgaagacatgagtcgatcggga
tccgagggtcatcgtgtacgacgttcgctaccagctataccacataatgcagtgcaagct
gccagggctgcagctgctagatcaaggaaagattcgaacagttcaacatcatctaatgat
aaaagcaaagcattctcgcagcaagacgacgacttcaacgcagatgtttcccaacaacac
ttagtcagccaaacttatgcagatgaagaaaacgagttacttataaaaccaataccgtcc
aaaaaatcctcaacaaaagttactcctgttgacaacaacacaactgatgacgtgggccct
ccattggttgacattgttcgcaattttaaagaaacatcaggaaacactcgtccctctcga
ccaagaagaccattatccggtaaaactcccaaagagtcctctccatcctcacgggagtcc
tccacagagcgtatacctcctcttctccgttccaacagtttcaccaaggagaagccgagc
ggagtggttccggactcggagatcccagatgcaacttgtaagatatctgaggttcctcct
ctcatccgatcaaacagcttctcgaaaccccatccagggatatctgaggaattaatccca
agaatatcggccgagagcgattcttcgagtgtttccgaagttgagttacaagacttatca
actaaggtgctcccaagttccaccattccctcgcaccagtttgatgattcaagcgttgtt
agtttagccgatggtcactcagatgacaaatggaagcgtccaagtccacgcagggcactc
agtgaacgaattaaaacttccaagggcgaaccactaagtgcgcggttaaggctcgaccaa
tcaaaatccaacaaaagcctcgcgcaacgagcgaaaaaaacttccccacaattgagtcgc
agacttagtagcgatactttgagcacgaaagcgaaaagtcgatcttccacaccaagttct
acctccgctaccacggcaagtaaccctactgttagtaatcgttcacctcaaacatcaagg
ggaaagaagcaagatttcacgagaagatcacttggctcacagacctcgtccacaacttta
tcctcggacacggaatgtttacgtcaaaacaatcgccgctcactgggtggcgtaacgcgc
acaaattcaaactctgattgtgaatcttcgttacgactaacgaggactacgttgctgcgt
caaaacaaggctaaagattctgataaaaacaggcctcgccaagctgaaacaacaagcacc
tccacaacgcaacaaacaactgataagaaaaagaataaaataacaagtcgtagcagcatg
gaaagattgaacgcgcttgctcggcctcctgcacgtcgtctgtctcgttgcagcgaaact
gaatcgtcggacaacgaaggttcgcataatctacgatcaacaaggaagaggggtactaca
actcctgtttcgaggtcacggcgccagtcacgtggcagcgtggcttcaactacagagacc
gatggcagtagtgcgcttgccacgcaacggacaactacaagtctcggggcaaggatagtt
cggaaaagtcgaactccagataatagactcaccaggtcaggaagtttagaccgagcaact
tacagatcccgtaagtttgaatcccgtcgcaagtcaaccacacctcatgtatattctgac
tgcgtgtcaacctcagaatctgagtacgatggccaacttgattccaataacaacatgcca
accagtgccagtataactactgatacaactgatgacacatacacatacaacaggtcccca
cccgatggtgaaatgagcgatgagatagctcgtgcaagtcacgatctcgctcgagatttg
aggatcttgacttcaaaaccacttgacgacctcgattccactctgacgtcatcaaccatg
atgacgtcatcatcagttataacaggagcatccgaagtcgatagtttagatatctcagtt
cagccgacgatggttattccgtcacctcctgctgtaaaaaccgacgcgaaaggacagaga
aaaacttggtcgaatggtggcgcccttgatgcgttgatgttgtccaatgtctgtgcgctc
accgaacgtttatgcgccgttgccgactcgcttacggggaagataggatacctacatggt
cgttcgtctccgtatgaagtaaccagatccaaagtcccgctgctgcagcaaacatccagt
caggagatggcgctagtggtcaacaatctacgtcacgttgaaatgcaactgacgcgagct
gacgatatcgtcgaccctgacaagaagctgcaagatttgttgcgaccataa
DBGET
integrated database retrieval system
