Ciona intestinalis (yellow sea squirt): 100175939
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Entry
100175939 CDS
T01056
Name
(RefSeq) NPC intracellular cholesterol transporter 2-like
KO
K13443
Niemann-Pick C2 protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100175939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100175939
Transporters [BR:
cin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
100175939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_DerP2_DerF2
DUF1344
Big_2
Motif
Other DBs
NCBI-GeneID:
100175939
NCBI-ProteinID:
XP_002127695
Ensembl:
ENSCING00000021770
LinkDB
All DBs
Position
2:complement(6261679..6262535)
Genome browser
AA seq
150 aa
AA seq
DB search
MKLYSFLILAGVAISIAHCKISIKDCGSKCGKIDSIAVTDCNTSPCKLNKGETYTFNVTF
TPNVAVNAAKSFVYGILDGLKVPFPISQPNACVDSNINCPMSKGTSYTYSAKLPIKSLYP
DVKVVVEWNLEDTEKNESIFCLLTPVEIVG
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgtattcatttctcatcctggctggtgttgcaatttccattgctcattgcaaa
attagtatcaaagactgtgggtcaaaatgtggcaagatagattctattgcagtaactgac
tgcaatacttcaccatgcaagctaaacaagggggaaacatacaccttcaatgtcactttt
acaccaaacgtagcagtcaatgcagccaaatcatttgtgtatggtattctggatggatta
aaagttccatttccaatttcccagcccaacgcctgtgttgatagcaacataaactgcccg
atgagcaaaggtacatcatacacatacagtgcaaagctgccaatcaagtctctctatccc
gatgttaaagtggtcgttgaatggaacttggaagacaccgaaaaaaatgaaagcattttc
tgcttgttgacccccgttgaaattgttggttag
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