Ciona intestinalis (yellow sea squirt): 100175952
Help
Entry
100175952 CDS
T01056
Name
(RefSeq) oxysterol-binding protein-related protein 8
KO
K22285
oxysterol-binding protein-related protein 8
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100175952
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100175952
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
100175952
Transporters [BR:
cin02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
100175952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
100175952
NCBI-ProteinID:
XP_002132154
LinkDB
All DBs
Position
1:6199278..6203326
Genome browser
AA seq
850 aa
AA seq
DB search
MDQNMEDISLSVPVTPSVQTAVSITTTNVSTPKTKSPRESFHASESPVLSSKLAKKHSLK
LQKQTYKVEKKKAENEFQMTVNDSSVILLSDWLKVRSTLKNWSRMWCVLKPGVLVLYKNS
KEKTWVGTVVLTSSEIIERPSKKDGFCFKIYNALNQTIWTIKGPKGESLGVLSSSLPTSY
LILRAQGESDGRCWLDALELSRKCTNLLKKSTEASSKVGKSKLEDNSEVFLPGRSVSLSL
GEQTEPNKVLDDSYIDLMDLQQKLSLLGHNQQSIMQENNIDCASSQQNNNSQSLMPPTSL
AILSNNQDSGDESSAPDSVDSYQDIDAEIKNADDQETKYVADKGEEFGDSGENSQTEVLA
GESKSLVWALLKQLRPGMDLSKVVLPTFILEPRSFLDKLSDYYYHANLLSNSAIEENPYN
RIKGITKWYLSGFYKKPKGLKKPYNPILGETFRCMWDHPETNSSTFYLAEQVSHHPPVSA
FVVINRKDGFTVDGSILAKSKFYGNSISAVLEGTAKVSLLKHGEEYTFTMPYAHCKGIIY
GKMTMEFGGKVCIQCEKTGYSAELEFKLKPLFGGGKLNEVSGRISLGKRVLATLSGYWDE
EVFLTDLSGGTVSRFWSPTEEVRKSRLKRYVVPLEQQVDFESEGLWKKVSSAIEKQDQVL
ATEEKYVLEDAQRKEAKKRKEEGVEWLTKHFQYDDKGEQWVYNHIDARPWDELNDIVQYE
KDGKITTRTKHCTSPVKTGLLQNVSRENATASSSFRSTLSEASEPGGRLNRKIKPTMHIS
SREITTAISELLIPIAQNQKEILACLEKLKQQMQLVAVNSRDNHSLPWNTILICFFMSLV
LYFLMGYPIN
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaatatggaagatatcagtttaagtgtgccagtgacaccttctgtacaaaca
gctgtgtccattacaacaacaaatgtatcaacacccaagacaaagtcacctcgagagagt
tttcacgcttctgaatcgccagttctctcttctaagcttgctaagaagcattcactaaag
ttgcaaaagcaaacatataaggttgagaaaaagaaagctgaaaacgagttccaaatgaca
gtgaatgactcctccgtgattttgctttcggattggttgaaagtaagaagtacgctaaag
aactggtcacgcatgtggtgtgttttaaaaccgggggtattagttctttataaaaactca
aaagagaagacctgggttggcactgttgtgttaacatcttcagaaataattgaaagacct
tcaaaaaaagatggattctgctttaaaatctacaatgcactgaaccagacaatctggacg
atcaaaggtcctaagggtgaaagccttggtgttttgtctagttcattgccaactagttat
ctaattctgcgtgctcaaggtgaatctgatggtcggtgctggttggatgccttggaactg
tctcgaaaatgtacaaacttgctaaaaaagtcaacagaagcttctagtaaagtggggaaa
agcaaactggaagacaactccgaagtttttttgccaggtcgttcagtttctctcagtttg
ggtgaacaaacagagccaaataaagtacttgatgattcttacattgatctgatggatttg
cagcaaaaactttctcttctaggccataatcagcaatcaattatgcaggaaaacaacatt
gactgtgcatcctcgcaacaaaacaacaattcacaaagtttaatgcctccaacttcactg
gctatactcagtaacaaccaggacagtggggatgagtcatccgctccagacagtgttgac
tcatatcaagacattgatgctgaaattaaaaacgcagatgatcaagaaaccaagtatgtg
gcagataagggcgaggagttcggagactccggtgaaaactcccagactgaagttctggct
ggagagagcaagagtctggtttgggctctgctgaagcagctgagacctggtatggatttg
tcaaaagttgttcttcctacctttatattggagcctcgctcatttcttgacaagttgtcc
gattattactaccatgctaatctgctgtctaattcggcaattgaggagaatccatataat
cgtataaaaggaataaccaaatggtatttgtctggattctataaaaaaccaaaaggtcta
aagaaaccatataacccaatattgggagagaccttcagatgcatgtgggatcatccagaa
acaaatagttctactttttatttggcagagcaagtttctcatcatccaccagtttctgcc
tttgtggttattaaccgaaaggatggttttactgtagacggcagcattttggcaaaatct
aagttttatggaaactctatttcagctgtattagaaggaactgcgaaggtttcattgttg
aagcatggcgaagaatacactttcacaatgccttacgcacattgtaaaggaatcatttat
ggcaagatgacaatggagttcggtggaaaagtctgcatacagtgtgagaaaaccgggtac
agcgctgagttagaattcaagcttaaaccactgtttgggggaggaaagctgaatgaagtt
tctggccgaatttctctcggtaaaagagtgctggcaactctaagtggatactgggatgag
gaggttttccttacagatttaagtggtggtactgtttcaaggttttggtccccaacagaa
gaagtacggaaatctcgcctgaagcggtatgttgtccctcttgaacagcaggttgatttt
gagtcagagggattgtggaagaaagtgtcatctgcaattgagaaacaagaccaggtactt
gcaactgaagaaaagtatgtacttgaagatgcacagcgtaaagaagccaagaagagaaaa
gaggagggggtggagtggttaaccaagcactttcaatatgatgacaagggagagcaatgg
gtttataatcacatagatgcccgaccgtgggatgaattgaatgacattgtgcagtatgaa
aaggatggtaaaattaccactcggacaaaacattgtacctctccagtaaaaacaggtttg
ctacagaatgtgtcaagggaaaatgcaacagcgtccagctcgtttaggtcaactttgagt
gaagcttcagaaccaggaggtcgtttaaacagaaaaatcaagccaacaatgcacatcagc
agccgagaaataacaacagctatctcagagttgttaataccaattgcacaaaatcagaaa
gaaatccttgcatgtttggaaaaattaaaacagcaaatgcaacttgtagcagtgaacagc
agagataaccattctcttccttggaatacaatattgatttgtttcttcatgagtctcgtt
ttgtatttcctaatgggatacccaattaattag
DBGET
integrated database retrieval system
