Ciona intestinalis (yellow sea squirt): 100175954
Help
Entry
100175954 CDS
T01056
Name
(RefSeq) ubiquitin-like domain-containing CTD phosphatase 1 isoform X2
KO
K17618
ubiquitin-like domain-containing CTD phosphatase 1 [EC:
3.1.3.16
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cin01009
]
100175954
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100175954
Protein phosphatases and associated proteins [BR:
cin01009
]
HAD phosphatases
Fcp/Scp phosphatases
100175954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
ubiquitin
DUF705
VRR_NUC
Rad60-SLD
DUF4191
Motif
Other DBs
NCBI-GeneID:
100175954
NCBI-ProteinID:
XP_018668563
Ensembl:
ENSCING00000006308
LinkDB
All DBs
Position
8:complement(3118655..3123576)
Genome browser
AA seq
333 aa
AA seq
DB search
MLIHSFSVYNLINNMTDKYKVVIKWNGQNYPLEISPDMTVKDLKLLIEGETKVRSDRQKL
LNLKFKGKPAEENAVLTDLKVKPNMKIMMMGTTEENLEEVLGPPPDVGEVINDFDIGDEE
EIKLEHMEEHLAKIERRVQTYEVKKINDPREGKKLLVLDVDYTLFDHRSNAEKADELMRP
YLHEFLTRAYVNYDIVIWSATSMKWIEVKMKELGVTSNQNYKIAFFMDHGAMITVHTPSY
GVIDTKPLGVIWGKYPEFYSAKNTIMFDDLRRNFLMNPQSGLKIRPFKNAHQSRTTDVEL
QGLSQYLEDISHLDSFKELKHRKWESYHKKVRK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgttaattcattcattcagcgtgtacaacctaattaacaatatgacagataaatacaag
gttgttataaaatggaacggacaaaattatccactcgaaatctccccggacatgacggtg
aaggatttaaaacttttaatcgaaggtgaaacaaaagttcgatctgatcgacaaaaactt
ctcaatcttaagtttaaaggtaaacctgctgaagaaaatgcagtgttgaccgatttaaaa
gtaaaaccaaatatgaagataatgatgatgggaaccactgaagaaaacttggaagaagtc
cttggtcctccacctgatgttggtgaagtcatcaatgattttgacatcggggatgaagag
gagataaaattggaacacatggaagagcatttagctaagattgaaagaagagtacaaact
tatgaagtgaagaaaattaacgatcctcgggaagggaagaaactcttggtgttggatgtt
gattatactttgtttgatcatcgatcaaatgcagagaaagctgatgaattaatgagaccg
tatctgcacgagttcctaacaagagcatatgttaattatgacatcgttatttggtctgct
acaagtatgaaatggattgaagttaaaatgaaggaattaggcgtaacaagcaaccaaaac
tataagattgcatttttcatggaccacggtgccatgataactgtacatacaccttcatat
ggtgttattgatacaaaacccttaggagtgatttgggggaaatacccagaattctactct
gctaaaaacaccattatgtttgatgatttgcgaagaaatttcctcatgaaccctcagtca
gggttaaagatccgtccatttaagaacgcccaccaatctcgaacaacagacgttgaacta
caaggtttatctcaatacttggaagatatttctcatcttgattcatttaaagaacttaaa
catagaaagtgggagagttatcacaagaaagtgaggaagtga
DBGET
integrated database retrieval system
