Ciona intestinalis (yellow sea squirt): 100176028
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Entry
100176028 CDS
T01056
Name
(RefSeq) erlin-1
KO
K23341
erlin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100176028
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
ERAD complex
100176028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Band_7
Motif
Other DBs
NCBI-GeneID:
100176028
NCBI-ProteinID:
XP_002127010
Ensembl:
ENSCING00000004195
UniProt:
F7B568
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Position
12:complement(4182928..4187773)
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AA seq
333 aa
AA seq
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MANSLIVLAVSVAAFAILINFSLHKVDEGHVAVYYRGGALLQTTSGPGYHVMFPFITTFR
SVQTTLQTDKVKNVPCGTSGGVMIYFDQIEVVNILSPAAVYEIVRNYTADYDRALIFNKV
HHELNQFCSVHSLQEVYIAKFDRIDENLKKALQVDLTEMAPGLYVQAVRVTKPKIPEMIR
KNYELMESEKTKLLIVNEKQKVIEKEAETERKKAVIEAEKVAQVARIQYDQKIMEKETQR
RMSEIEDQSHLARMKARTDAQCYQALKEAEANSLKLTPEFLELRRIEALAQTSKVYYGPN
IPQMLMDSFSPMTVKPKAEVVAEEYKQENTNMD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatagtttgattgttcttgccgtttctgtcgctgccttcgccattttaatcaac
ttttctttgcataaagtggacgaaggacatgtagcagtttactacaggggaggagcacta
ctgcaaaccacatcgggacctggatatcatgtcatgtttccattcatcacaaccttccga
tctgtccagacaactttgcaaactgataaagtgaagaatgtaccttgtgggacaagtggt
ggtgtgatgatatactttgatcagatagaggttgttaacatattgtcaccggctgcggtg
tatgagatagttcgtaactatacagctgattacgaccgtgctctaatctttaacaaagtt
caccatgaattgaatcaattctgttctgtgcattctttacaagaagtatatattgctaaa
tttgatcggattgatgaaaacttaaagaaagctttgcaagttgacctcacagagatggca
ccaggattatatgtgcaagctgtccgagtgacaaagccaaaaatcccagaaatgatcaga
aaaaattacgagctcatggagtctgaaaaaacaaaattgttaattgtcaatgagaaacaa
aaagttattgagaaggaagcagagactgagcgaaagaaggctgtgattgaggctgagaaa
gtggcgcaagtggctcgtattcaatatgatcagaagattatggagaaagaaacccaacgt
agaatgtctgagattgaggatcaatctcacttggcaagaatgaaagcacgaactgatgct
caatgttaccaagctttgaaagaggcagaagctaattcgcttaaactgacacctgagttc
ctggaattaaggagaattgaagctttagctcaaacttccaaagtttattacgggccaaat
attccgcaaatgttaatggacagtttcagtccaatgacagtcaaaccaaaagccgaagtg
gttgcagaagaatacaaacaagaaaataccaatatggattaa
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