Ciona intestinalis (yellow sea squirt): 100176090
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Entry
100176090 CDS
T01056
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04137
Mitophagy - animal
cin04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100176090
04137 Mitophagy - animal
100176090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176090
03029 Mitochondrial biogenesis [BR:
cin03029
]
100176090
Membrane trafficking [BR:
cin04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100176090
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
100176090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
EIF3I
WD40_MABP1-WDR62_2nd
DivIC
Motif
Other DBs
NCBI-GeneID:
100176090
NCBI-ProteinID:
XP_002128991
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MSSKQSRKPNIVVALRNRSSGCTQRKFTQGPLKAFAEKCAATLSSKNRKVELPARTRTTF
MTAFSPDNRLIASCHGDHNIYISNISTGKVENSLVGHSRSPWCLSFHPSSNDIIATGCLN
GEVRVWDLRGGGSESWMVSENEAMVTIASLSFHPTDHVLLIAAGNEIHFWDWSLPQPFAS
VKTGSAAERVRLVRFDMWGTNILTGVVNFEEEQNSGTDEEENESVENPVSSWNQPSSIGD
SLTRRRQLLRSWMRGRPRTPVSVENDETVEPREIPLPSNPVRRAPIPLYIRRRQAGGRSN
SPSVYNLRSRDRRSVATDFPDTEQLETSRPETNTSEETEPQERFLSLRLHSLNRLFELRQ
RMSDLSNSRAVDHQRILHARVSVNAEIQHQYNRLRLLRQERRRLELRLQQLQGRSSQSNS
SPVQPTVVPSEAPLLNNPAADIVPIFSELHPHTDPEHNDLSTESVTENISTEFNSHSRPR
NLLTPSRTNVAEESIPGNLVVPINPEIPVYLSPMEETPATNPSPSPSRNRTIPSYFPTLS
NSTSSTYRSSGSSRRTTQPPFYFVPGTQGPDLELSQDFTFSRTPNQRLRLRQSRAIWRRH
RRRFHASNINQILSLHPQGHVDRFSYRLQWWDFSKLALPEIGRSDTNVIVPHCKIYNDSS
VDISKDGTKLATFIPTEVGFPESMQVAVYSLLPDTLGEVLFRKPFGPHAVCLSLSPLGDY
LAVGVKNRPYLPEALSTSRSPMAQILKLNKNGENNYSPVVNQIMHPINPDTPHRFVSINT
VAWLPNIGDGLLYGTNNGELRICQPAS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaacaatctcggaaacccaacatcgttgttgcacttagaaaccgatcaagt
ggttgtacccaaagaaaattcacgcaggggcctttaaaggcgtttgccgaaaaatgtgct
gcaacacttagttcaaagaatcgcaaggttgaacttccagctcgaactcgaacaacgttc
atgactgcattcagtcctgacaacaggcttatagcaagttgccatggtgatcataatatt
tatataagtaatatttctactgggaaagtggaaaattctcttgttgggcattctcgttca
ccttggtgtctatcgttccatccaagttccaatgatattatcgccactggttgtttaaat
ggggaggttcgtgtgtgggatttacggggaggaggaagtgaatcttggatggtgtcggaa
aacgaagcaatggtcactattgcttcactctcatttcatcccaccgatcacgtacttctt
atagcagcagggaacgaaatccacttttgggactggagtctcccacaaccatttgcttct
gttaaaactggatctgcagctgaaagagtgagattggtgaggtttgatatgtggggtacc
aatatattaacgggagttgttaattttgaagaagaacaaaactctggaacagacgaagaa
gaaaatgagagcgtggaaaatcctgtttcatcttggaatcaaccctcttcaattggagat
tcattaacaaggagaagacagttgcttagaagttggatgagaggaagaccaaggactcca
gtttcggtggaaaatgatgaaaccgttgaaccaagagaaatacctcttccatcaaatccc
gttcgtcgtgctccaatacctctctatattcgcagaagacaagcaggcggtcgtagcaac
tctccttcagtttataatttaagaagcagagatcggagatcagttgctactgattttcca
gatacagaacaacttgaaacatctcgtccagaaactaacacctctgaggaaacagaacct
caagagcgattcctttcgttaagattgcacagtttaaatcgtttgtttgaattgagacag
agaatgagtgacttgtccaattctcgggctgttgatcatcagaggattctgcacgcccgt
gtaagtgttaatgctgaaatccagcatcagtataatcgacttagattgttgcgtcaagag
cgtcgacgactcgaacttcgacttcagcaactccaaggtcgaagtagtcagtctaattca
tcaccagtccaacccactgttgtcccatctgaagcacctttgctaaacaacccagctgca
gatatagttcctatattttccgaattacatccacacacagatcctgaacataacgatctt
tcaactgagtcagtaacagaaaacatatcaactgaatttaattcacattcgcggcctcga
aacttgttaacaccatcgagaacaaacgtagccgaagagtcaatcccaggcaatctggtt
gtcccgataaacccggagattccagtttatctttccccaatggaagaaactcctgcaacc
aacccgagtccctcaccatcacgaaataggacaataccttcatactttcctaccttgagt
aactccacatcaagtacataccggtcttctggcagttcgaggcgaacaacccaacctcca
ttttactttgtaccaggcacacagggtcctgatttggaactttctcaagattttacgttc
agtagaactcctaatcaaagattacgtcttcgtcaatcacgagctatatggcgaagacat
agaagaagattccatgcaagcaacatcaaccagatcctctcccttcatccacaaggtcat
gtagatcgtttctcgtaccgtttgcagtggtgggatttttccaagcttgctttacctgaa
attggaaggtcagataccaatgtcatcgtgccacattgtaaaatctacaatgattcgagt
gtcgatatttccaaggatggaacaaagctagcaacgttcattccaacagaagttggattc
cctgaatctatgcaggttgctgtgtattcattgctcccagatactttaggagaagtcttg
tttaggaaaccatttggtccacatgctgtatgtttaagtttgtcacctctgggagactac
ttggctgttggtgttaaaaatcgaccttatttgccggaagccctatccacaagcagaagt
cctatggctcaaattctgaagcttaataagaacggcgaaaacaattattcaccagttgtt
aatcaaatcatgcatccaataaatccagacacaccacatcgatttgttagcatcaacaca
gtggcatggctgcctaacataggagacggtttattgtatggaactaacaatggagagttg
cgtatttgtcaacctgcttcttag
DBGET
integrated database retrieval system
