Ciona intestinalis (yellow sea squirt): 100176110
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Entry
100176110 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100176110 isoform X8
KO
K12382
saposin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100176110
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100176110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100176110
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100176110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SapB_1
SapB_2
Saposin
SapA
Motif
Other DBs
NCBI-GeneID:
100176110
NCBI-ProteinID:
XP_009860534
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All DBs
Position
12:4722865..4743480
Genome browser
AA seq
1129 aa
AA seq
DB search
MKSPLCIVILSLVAYEVQSAVVGADRCTWGPSYWCKNYGAAKTCGAVDHCKTNAWNKPVK
NDEICTLCKEGMEMVDNYLKEKATKAKIEKAILQICSDIPLADLKTECKQVVTENFDLIY
DEGLILIGNGDMVCSAIGLCTSSSTSEVEDKIVHEMVKKLPDIVRKAMENNELPVASPFI
APLPLFSQPETPQEGSENYCADCQAFIKDVQHEIMNDPAMVKSWTNLVKGECDALGAGLD
EICMQKAEEAIHDITSYHLTDSDVTTICNTIKMCGFRAQAKSDNDMCTDCTNFFDDWKQL
MINNKTVVNEIIGQMSDFYCLQKPANLRKQCVRYVGMVIETFLNRLMQESPMDICRSIYF
CEAGTAKESLSAITRVNTLQQVPVELDNQKYCTDCTAFMKDLQGVAANNKTIISELTELV
KEQCSQFDPVVAELCKLQVPNAVTTLLPQFEKLDVNTICSTIMMCPATSQHKKMVTGNLC
TDCTAFFGDWQEIIQNNKSVIEKQLKELGVMYCKQVPGFFESECDSVVAKAIDNYLHLIS
VTDAGLICSTLYMCEEADKPAVQPVSVAKQAPVGAGDPISCAVCKLVVHELDQMLEGNKT
EAAVVAALEKVCSLMSGDIRQECQNFVDHYGRTLVDLIINEVESGAICSMLLLCSPQANY
NKVSGSPTCEVCTLIATALDQLLTSNSTEQEIIAAVEKVCSILPATYKTECDSLIDQYGV
VIIQLLAQELDPSKICAELGLCVSYKSQVSDSTTCELCELVAGELDSLLTENSTESEIIA
AVEKVCTILPSNLQTECKTLIDQYGKEIINLLAQQIKPAQLCATLKLCTSYAVSSSTTCE
VCELVASELDKLLTDKSTETEIVDAVENICKVLPANLQTECKDLIDQYGTDLINLLAQEI
KPSELCAAIKLCSSYKNTQIKVRSDVTCELCTAVMTQVDKLLSENATQTEIVAALDKVCM
IIPGDLKQQCVGFINDNGPMIIQLLLEEIAPSAVCSSLKLCSNSNKVMFKSSELCDVCKA
AIGFLDQEVGANSTKAEVEAALDNLCVKLPASLKETCDDLVKQYTPEILDMIENIADPDY
ICIHLKLCTAQNHMLGANPCTFGPSYWCKNQQTATECNAVSHCEKHVWE
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcacctttgtgcatcgtgattttatcattggtcgcatatgaagtgcaatctgct
gtagttggagcagatcgttgtacatgggggccatcatactggtgtaaaaactatggggct
gcaaagacctgtggggcagtggatcattgtaaaaccaatgcatggaataaaccagtaaag
aatgatgaaatttgcacactctgcaaggaaggtatggaaatggttgataactacttgaag
gaaaaggcaaccaaagcaaagattgagaaagctattcttcaaatctgttcagatatccca
cttgctgaccttaagactgagtgcaagcaagttgtcactgagaattttgacttaatttat
gatgagggtcttatcttgattggaaatggtgacatggtttgttcagcaattggtttatgc
acttcttcctcaacctctgaggtggaagacaagattgttcatgaaatggtgaagaagctt
ccagatattgtgaggaaagcgatggaaaacaatgaacttcccgttgcttctccgttcatt
gcaccattgcctttattcagccaaccagaaacaccacaagagggaagtgagaactactgt
gcagattgtcaagcttttattaaggatgttcaacatgagataatgaatgaccccgccatg
gtgaaatcgtggactaacttagtgaaaggagaatgtgatgcattgggtgctggcttggat
gagatttgtatgcagaaggcagaagaagcaatccatgatataacatcataccatttaact
gatagtgatgtcacgacaatttgtaacacaatcaagatgtgtgggttcagagctcaagcg
aagtcggacaatgatatgtgtactgactgcaccaacttcttcgatgattggaagcaactt
atgatcaacaacaagactgtggtgaatgaaattattggacaaatgtctgatttttactgc
ctgcaaaagccagctaatctacgaaagcagtgcgtacgatacgtcggcatggtgattgaa
acttttctcaaccgcctcatgcaagaatccccaatggatatctgccggtcaatttacttc
tgtgaagctggaactgcaaaggaatctttgtcagcaatcactagagttaatacgctacaa
caggttccagtagaactggataaccagaaatattgtacagactgcacagctttcatgaag
gacttgcaaggagtagcagccaataataaaacgatcatctctgaactcacggagctcgta
aaggaacaatgcagtcagtttgatccagttgttgcagagttgtgcaagttacaagttccc
aatgccgtaactacacttcttccacagtttgaaaagcttgacgttaacaccatctgctca
acaatcatgatgtgccctgctacttcacaacacaagaaaatggtcaccggcaatttatgt
acagactgcactgctttctttggagactggcaagaaattatccaaaacaacaaatcagtt
atcgaaaaacaacttaaagagcttggcgtcatgtactgcaaacaagtgccaggatttttt
gaatctgagtgtgattctgttgtggccaaagcaattgataattatctacacctgatatca
gttacagatgcagggttgatctgcagtaccctgtacatgtgtgaggaagccgataaacca
gccgtacaacctgtaagtgtggcaaagcaagctccagtaggtgcaggggatcctatatca
tgtgcagtatgcaagctagttgttcatgaactcgatcaaatgcttgaagggaacaagaca
gaggcagcagtggtggctgcacttgagaaagtctgcagtttgatgtcgggcgacataagg
caagaatgtcagaatttcgttgatcattacggcaggacactcgttgatctcattataaat
gaagttgaatccggtgccatctgctccatgcttctactctgttctccacaagcaaactat
aacaaggtatctggttcaccaacatgcgaggtgtgcacattgattgcaacggcattggat
cagttgcttacaagcaacagcactgagcaagaaattatcgcggcagttgagaaagtttgt
agcatcttacctgctacatacaagacagaatgtgactcacttattgatcagtacggggtt
gttatcatacagttacttgcacaagaattagacccatcgaaaatttgtgctgagctcggt
ctgtgtgtttcatacaagtcacaagtgtccgattcaacaacatgcgaattatgtgaactg
gttgccggggaattggacagcttgttaacggaaaacagcaccgagtcggaaatcattgcc
gcggttgaaaaggtttgcaccatcttaccgagcaacttacaaactgaatgcaaaacactc
atcgatcaatatgggaaagagattattaacttgcttgcacagcagattaaaccagcccaa
ctttgtgcaacactcaaactgtgtacttcatatgctgtgtctagttcaacaacatgcgaa
gtatgtgaattagttgccagtgagttggacaaactactgacagataaaagcaccgagacg
gagatcgttgatgcggtggaaaacatctgtaaagttctcccagctaatctacaaactgaa
tgcaaagacctaattgatcagtacggaacagatttaatcaaccttcttgctcaagaaatc
aaaccgtcagagttatgtgcggctattaagctttgttcgtcatacaagaacacacagatt
aaagtcagatctgatgtgacatgcgaattatgtacagcggtcatgacacaagttgacaaa
ctgctctcagagaacgcaacacagacagagattgtagcagcccttgacaaagtttgtatg
ataatccctggtgacttgaaacaacaatgtgttggattcatcaatgataacgggccaatg
atcattcaactattgttggaagaaattgcaccaagtgccgtctgctcatcactcaagctc
tgttctaattctaacaaggtgatgttcaaatcatccgagttatgcgacgtatgcaaagca
gccattggcttccttgaccaagaggttggggcaaactcaaccaaagctgaagtagaagct
gcacttgataacttgtgcgtcaaactacctgcttctctaaaggaaacttgtgatgaccta
gtgaaacaatacacaccagaaatacttgacatgattgaaaacattgctgatcctgattac
atttgcatccaccttaaactgtgtactgcacaaaaccatatgttgggtgcaaacccctgc
acttttggaccaagttattggtgtaagaatcagcaaacagctacagaatgtaatgctgtc
agtcactgcgaaaagcatgtttgggaataa
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