Ciona intestinalis (yellow sea squirt): 100176124
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Entry
100176124 CDS
T01056
Name
(RefSeq) YTH domain-containing family protein 3
KO
K20102
YTH domain-containing family protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100176124
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100176124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
DUF7275
Shikimate_dh_N
Motif
Other DBs
NCBI-GeneID:
100176124
NCBI-ProteinID:
XP_002130883
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Position
2:153851..157267
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AA seq
625 aa
AA seq
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MSNATLDPDQHHKTQTGRSRMQNGLESKGQTGRNDEFDSSYMHQANVNPAYGMAPTSDSY
MPSYYGQMPFPYMGSSEWSTGSTDNMPYLSGFGGEAQQHSFLPDAMFSHPPAALGNTPAY
YNQPYNFFQHGTDFSPWASHSSAHGTGMPETPGGTGFGQQTAAPTYNGDYYPSIMPATPH
DYLGTGEAIVSNGSVLGHGAPGAAIPGVGGSTVMSSGDPIGKLPVGSSSNSMKMVEQGIQ
NMGLGMSSMSGDPMKQMQVTPVIPMPGGGSIVSAGAPQNATNISGQSSQSASSSNNSTPV
PGSNAPKPVSWAAIASKPAKPQPKPKAKSMVGPGLPPPIKHNMDIGTWDSQTPAKGPAKG
QMPGQPGAPQRWSAPRQGPADGSVSSNHHSANAGNTNTNFHYNNAQTKEESGNEVLEKLK
AENDYNPKRLTIDVRNARFFVIKSYSEDDIHRSIKYNIWCSTDHGNKRLDAAFREQQGHG
PVILLYSVNGSGHFCGVAEMLTQIDYSKRAGVWAQDKWKGKFQVKWIYAKDVPNSQLRHI
RLENNENKPVTNSRDTQEVPAEKGRQVLKIISSYKHQTSIFDDFSHYERRQVEEEGLRQK
RNELRSRDNHKEKQSAHPDQASPKN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgcaacattagatcctgatcaacatcataaaactcaaactggtcgaagcaga
atgcagaatggtttagaaagtaaaggtcagactggaaggaatgatgagtttgattcaagt
tatatgcatcaagctaatgtgaatccggcttatggcatggcaccaaccagcgactcctac
atgccaagttattatggccagatgccgtttccttacatgggaagttcagagtggtcaaca
gggagtacagataacatgccgtatttatctggatttggtggggaagctcaacaacacagc
tttctacctgatgccatgttcagtcaccctccagctgcacttggaaatacaccagcgtat
tacaaccaaccgtataatttttttcaacatggaactgactttagtccgtgggcatcacat
agctcggcacatgggactggaatgccagaaactcctggtggaactggcttcggccagcaa
actgctgcaccaacttataatggtgattattatccatcaattatgccggcaactccgcat
gattatttaggtactggtgaagctatagtttccaatggtagtgtcttgggtcatggtgcc
ccaggtgctgcgataccaggtgttggtggaagtactgtcatgtcaagtggtgaccctatt
ggtaaactacccgttggttcttcatcaaatagcatgaagatggttgaacagggtatacag
aatatgggacttggtatgtcttcaatgtctggcgatcctatgaagcaaatgcaagtaact
cctgtcattcccatgcctggtgggggatctattgtgtcagcaggtgcaccacaaaatgca
accaacattagtggacaatcaagccaaagcgccagttcaagtaacaatagcacaccagtg
cctggttccaatgcaccaaagccagtatcatgggcagctattgcatcaaaacctgcaaaa
ccgcaacctaaaccgaaagctaaatcgatggttgggccaggactaccaccacctattaag
cataacatggatattggaacttgggactctcagactccagctaaaggaccagcgaaaggt
caaatgccaggtcaaccaggtgccccgcagagatggtcggctccacggcagggacctgca
gatggttcagtttcatcgaatcaccattctgcaaatgctggaaacacaaacactaatttc
cactacaacaatgcacaaactaaagaagaatcaggaaatgaggtgttggaaaaattaaaa
gctgaaaatgactacaacccaaaacggttgaccatcgacgttcggaatgcaagatttttt
gtaattaaatcgtattctgaagatgatattcatcgttctatcaaatacaacatttggtgc
tccactgaccatggcaacaaacgattggatgcagcgtttcgtgaacagcaaggacatggc
ccggttattttactctactctgtaaacggttctggtcatttctgtggcgttgcagaaatg
ctcactcagattgactacagcaagcgtgctggtgtttgggctcaggataagtggaaagga
aagtttcaggtgaaatggatttatgcgaaggacgttcctaacagccagcttcgtcatatt
cgtcttgaaaataatgagaataaaccggtgacaaactcacgtgacactcaggaggttcct
gcagagaaaggaagacaagttcttaaaatcattagtagctataaacatcaaacaagtata
tttgatgacttttcacattacgaacgccgtcaagtggaagaagaaggtcttcgtcaaaaa
cgtaatgaactgagatctcgggacaatcacaaagaaaaacaatcagctcatccagaccaa
gcgtcgccaaaaaattaa
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