Ciona intestinalis (yellow sea squirt): 100176161
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Entry
100176161 CDS
T01056
Name
(RefSeq) RNA-binding protein lark
KO
K13187
RNA-binding protein 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100176161
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100176161
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DbpA
Motif
Other DBs
NCBI-GeneID:
100176161
NCBI-ProteinID:
XP_002128423
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MVKIFVGNIADGVTTEEMRDLFEQYGNVTECDVLGTYGFVHLATDAEAEHAIKNLDKRDV
KGQQINVEKSKSGSRGRDRGGSGFRGGRGGMRGSFGYGGGYAPMVDNSATAKSARRAGCT
KLHVANLPDGVYSGELRDLFSRYGYVAECDVVEDRKIAFVHIEDAAADAAIHALNGHNFK
GIPLKVQMSKNQTRDLGPPGSGMRGGSRGGLGPRGGRGGMMGRGRPDYPSIARGFGRERG
NGMGHDGYGSNGDSGFGSESALPPPVKDRMELLELLDRKRRLEILDPYERRLIACPDPYN
LPPPPPEYLSLLRERAMVXXRLPHPPASGSALSRSLPTAGSAKSSSALTRALIARRAAVA
AASVKDEPHSSSLGLGSYGETKASPSFSYSSDLYSQNAHARDY
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagatatttgttggaaatattgccgacggtgttacgacggaggaaatgcgtgat
ttgtttgaacagtacggaaatgttacagagtgtgatgtcctgggaacttacggattcgtt
catcttgctaccgatgctgaagcagaacacgcaatcaaaaacctggataagagagatgta
aaaggtcagcaaatcaatgttgaaaaaagtaaaagtggatcaagaggtcgagacagggga
gggagtggttttcgtggcggaagaggaggcatgcgaggcagtttcggatacggaggcgga
tacgcgccaatggttgataattcggcgaccgcaaaatcggcgcgtcgagcgggttgcaca
aagctgcatgttgccaatctaccagacggggtgtattcgggcgaacttcgcgacttattt
tcacgatacggttacgttgcggagtgcgacgttgtggaagacagaaaaatcgcttttgtt
cacatcgaagatgcagctgctgatgctgccattcatgcattgaatggccacaattttaag
ggcattcctttaaaagtacaaatgtcaaaaaatcaaactcgtgatttgggtccgcctggc
tctggtatgaggggcggcagccggggagggcttggtccacgtggaggccgagggggtatg
atgggtcgtggacgcccagactatccttctatagctcggggttttggtagggagcggggt
aatgggatggggcatgatgggtatggttccaatggggattctgggtttggctctgagtct
gctttgccaccacctgttaaagatagaatggagttattagagctgttagatcgtaaacgg
cgtttagagatccttgacccttatgaaaggcgtcttattgcatgtcctgatccttataac
ttgccacccccacccccggagtatttaagcttgctccgtgaacgcgccatggttnnnnta
cggctgccacacccaccagcatcaggatcggcattgagtcgtagcttgccaactgctggc
agtgcaaagtcatcaagcgcattaacaagagctcttattgcgagaagagctgctgtagcc
gcagcatcggtaaaagatgaaccacacagctcaagccttggcttgggttcatatggtgag
acaaaagcttcaccctcgttctcatacagctctgatctgtacagccaaaatgctcatgcc
cgtgactattga
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