Ciona intestinalis (yellow sea squirt): 100176170
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Entry
100176170 CDS
T01056
Name
(RefSeq) valine--tRNA ligase-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100176170
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100176170
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100176170
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100176170
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100176170
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100176170
Prokaryotic type
100176170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Cep57_CLD
Val_tRNA-synt_C
GST_C_3
Arc1p_N_like
tRNA-synt_1e
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
100176170
NCBI-ProteinID:
XP_026693603
Ensembl:
ENSCING00000009087
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MALYFSGSKLNYSCLKIKVAANFAAQPLKILPNTDPKQSIRYEKDGTTFTDSNAISYLVG
KECLWGNTLNENSEIRQWIGYADDLNTRVCCWVYPYMGLRNYNKQEVNHAQAEVLKYLAI
LDQHLLHNMYLVGDRITQADVACAVALYFPFKFFLTPATREKFVSATRWFNTLVNQEQFR
NAIDAVAGGDGDVQLCVAEVKYDKGGCDAFRKLALQENDVTISAKESEGKGEKPKTEAQL
KKEAKKREKMEKFLAKNKKAQEQSQAKEGKKPKPKRAEKSEKKATIIKYEKNTPPGEKKD
VSGPLPDSYSPQYVEAAWYSWWEKMGFFKPEYGRKSAHEENPKGTFMICLPPPNVTGSLH
LGHALTNTVEDVLTRWNRMKGKTVLWNPGTDHAGIATQVVVEKKLWREQKLSRHDIGREG
FIKEVWKWKNECIFTQVNKQELTGRTMLSIPGYDHKVEFGVLISFAYPVVDSDEELVVAT
TRIETMLGDTGVAVHPEDPKYKHLHGKYVQHPFTDRKLPVVCDEMVERDFGTGAVKITPS
HDPNDYECGKRHNLKFINIFSDDGDVINTNTEFDGMKRFTARTAVVEALKNRGLYRGTKD
NPMVVPVCSRSKDIVEPLIKVQWFMDCKEAAKRSVDAVRNGQLKLIPDMHCKTWYHWLDN
IRDWCISRQLWWGHRIPAYFVTIDDSSIPKGEETDGEYWVSGRSENEATNKAAKKFNVCP
SKIKLRQDEDVLDTWFSSGLLPFSIFDWPQETEDLKTFFPGTLLETGHDILFFWVARMVM
FSLMLTDKLPFEEVYLHAMVRDAHGRKMSKSLGNVIDPLDVVTGISLEDLHKSLLTGNLD
EKEVKKAMAGQKEDYPNGIPECGSDALRFALSAYTCQGRDINLDVNRILGYRHFCNKLWN
AFKFAMRGLGEGFVPSTTAQLNGHESHMDLWILSKLSQAVKLSSDGLAKYEFPVYTTAVF
NFWLYELCDVYLECLKPVFSGNNPDAIMTSRNVLYTCLDVALHLTSPLMPFISEELWQRL
PRRSGDDTPSVTVSNWPEIEKLNWRNEKIEQEVDFVLNLNKVTRSLRSEYNLTKTKADLY
VHCNDDETKAIVTRYVTTIQTLSYSSLVKVLGSSEKPPPGCAVAIVNDKCNVNLMLKGLI
DLEKEISKLATKRADQEKKLKSLQDKISKEEYKKKVPANVQTSDADKVQQIIGEVEKMKT
AEEEFRRMLSA
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggctctttatttttctggaagcaaactaaattattcttgtttaaaaattaaagttgct
gctaattttgccgctcaaccattgaagattctgcccaacactgatcctaagcaaagcatt
agatatgagaaagatgggacaaccttcaccgattcgaacgcaatctcttatctggttggg
aaggagtgtttgtgggggaataccctgaatgagaactccgagatccggcagtggatcggt
tacgctgatgatctgaacactagagtgtgctgttgggtatatccttatatggggttgagg
aattataataaacaggaggtgaaccatgcccaagcagaagttttgaaatacttagcaata
cttgatcaacaccttctacataacatgtacttggttggagacagaataacacaagccgat
gttgcatgtgcagttgctttatattttccattcaaatttttcctgaccccagcaacgagg
gagaaatttgttagcgccacccgatggttcaacaccctcgtcaatcaggagcaattccgt
aacgcaatcgatgcggttgccgggggcgatggtgatgtgcagttgtgcgtggccgaggtg
aaatacgacaaagggggttgtgatgcgtttaggaaactcgctctgcaggagaatgatgtc
acaatcagtgcaaaagagagtgagggaaaaggagagaagccaaagactgaagctcagttg
aaaaaggaggcaaaaaaaagagaaaaaatggaaaagtttcttgctaagaataaaaaagca
caagaacaaagtcaagctaaagagggcaaaaagcctaaacccaagcgagctgaaaagtct
gagaagaaggcaactataataaagtatgagaaaaatactccacccggtgaaaagaaggat
gtatcaggtccactaccggacagctacagcccacaatatgtagaagcagcttggtattct
tggtgggaaaagatgggattcttcaagcccgagtatgggcgtaaatctgcccatgaagaa
aatcctaaaggcactttcatgatctgccttccccctcccaatgttacaggaagcctccat
cttggccatgcattgactaatactgtggaagatgtattaacaagatggaaccgaatgaaa
ggcaagacagtgttatggaaccctggcaccgaccatgcaggtattgctacacaagtcgtt
gtggagaaaaagttatggcgcgagcagaagttgtctcgtcatgatattggaagggagggt
tttattaaagaagtttggaaatggaagaatgaatgtatcttcactcaggtaaacaagcaa
gaactcacgggacgcacaatgctcagtatccctggttacgaccacaaggtggagttcgga
gtcctcatctcatttgcatatcccgtcgtcgatagtgacgaggagcttgttgtcgcgaca
acgaggattgaaacgatgttgggcgatacgggggtggcggttcatccggaggatcccaag
tataagcacttacacggcaaatacgtgcaacacccgttcaccgatcgcaagttacccgta
gtttgcgatgaaatggtggagcgagactttgggaccggggctgttaaaataaccccctcc
cacgaccctaatgattatgaatgcggaaagcgtcacaacctcaagttcatcaatattttc
tccgacgatggtgatgtcataaacacaaacacagagtttgacgggatgaaacgcttcact
gcacgcactgctgttgtagaagcgctcaagaacagagggctttatcgaggaacaaaggac
aaccctatggtggtacctgtgtgtagtcgatctaaagacatagtagagccacttataaag
gtacagtggttcatggattgtaaggaggccgctaaacgctcggtcgacgctgtgaggaac
ggacaacttaagcttatccctgatatgcattgtaaaacatggtaccattggttggacaac
attagagattggtgtatatcccgtcaactatggtgggggcatcgaataccagcttatttt
gttacaattgatgattctagtattcctaaaggagaggaaacagatggtgaatattgggta
tcaggtcgtagtgagaatgaagcaaccaacaaagctgccaagaagtttaacgtttgccct
tccaagatcaaactccgccaggatgaagacgtactcgacacttggttctcctcgggattg
cttcctttctctatctttgactggccacaagagacagaagacttgaagacctttttcccg
ggcaccttgctggaaaccggacatgatatcttgtttttctgggttgcaagaatggtcatg
ttctctctgatgcttactgacaaactaccatttgaagaagtttatctgcacgccatggta
cgcgacgcccacggtcgcaaaatgagcaaatcacttggaaatgtaatcgacccattagat
gttgtaacagggatatctctggaggaccttcacaaatctttattaactggtaacttggat
gagaaagaagttaaaaaagcaatggcgggccagaaggaagattatcccaatggtatacct
gagtgtgggagtgatgcattgaggttcgcactaagtgcttatacttgtcaaggacgtgac
atcaacttagacgtgaaccgaattctcggatatcgacatttctgcaacaaattatggaac
gcgtttaaatttgctatgaggggtttgggtgaaggttttgtaccaagtacaacagcacag
ttgaacggccatgaaagtcacatggatttatggattctcagcaaattatcgcaggctgtg
aaattaagttctgatggattggccaaatatgagttccctgtttatacaacggctgtgttt
aacttctggttgtatgagttatgtgatgtatatttggaatgtttgaaacccgtcttctcc
ggcaacaatcccgatgccattatgacatcacggaacgtattatacacttgtctcgatgta
gcgctccacttaacatcccccctcatgccatttatcagcgaggaactatggcaacggttg
ccacgacgatcaggagatgacacgccaagtgtgaccgtgtctaactggccggagattgaa
aagttgaactggcgtaatgaaaagatcgagcaagaagttgattttgttttaaatttgaac
aaagtaactcggtcactcaggtcggaatataatctcaccaagaccaaagcagatttatac
gtccattgtaacgatgatgaaacaaaggccattgttacacgttacgtgacaacaatacaa
acattatcctactcgtcgctcgtcaaagtattaggatcctcggagaagccgccaccgggg
tgcgctgttgccattgttaacgataaatgtaacgtcaatcttatgttgaagggcttaatt
gacttggaaaaagaaatttctaagctggcaaccaagagagctgaccaggaaaagaaatta
aaatctcttcaagataaaataagtaaagaagaatataagaaaaaggttccggcaaatgta
caaacatcagatgctgataaagttcaacaaataattggggaagttgaaaaaatgaaaact
gcagaagaagagttcaggagaatgcttagtgcttga
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