Ciona intestinalis (yellow sea squirt): 100176183
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Entry
100176183 CDS
T01056
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 8, mitochondrial-like
KO
K05655
ATP-binding cassette, subfamily B (MDR/TAP), member 8
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100176183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100176183
Transporters [BR:
cin02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100176183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
APS_kinase
Zeta_toxin
AAA_22
AAA_18
ABC_ATPase
AAA_33
RsgA_GTPase
Homeodomain
Motif
Other DBs
NCBI-GeneID:
100176183
NCBI-ProteinID:
XP_026691628
Ensembl:
ENSCING00000001631
LinkDB
All DBs
Position
9:complement(3169701..3180234)
Genome browser
AA seq
591 aa
AA seq
DB search
MHFQYISLLVGRHALKLRLPVNQTLLVSKSTLRNAKQILKAEFQKCTWLKNKNIKRLAQF
TAISGTAIVSVSQALKLSGSHVICHGLEKPIEAENNVVAKEFSWTEFFNDYLLPEILPLS
LAIMSALVGAFVNMKIPGALGELINILNQQAQTGLSNVADYMKGLREPVIQLMALYLCQG
FTTFLYISLLSHLGENVACKLRTNLFKSFLQQDVAFHDEHKTGELIDRLTSDVQDFKSSF
KLCVSXGIRSSTQTVGCICSLYSTSPKLTLALAGTIPLIVLFLFPGQLMSFLVSAQMIQR
SLASLSVLSGTAVRGVTAGGRVFEYIHKQPSIPTHGGRIIPYHCLLGHLKFDDVHFTYPQ
RQGHEVLKGVSLDIKPCQTVALCGLSGAGKSTVASLVERFYDPTSGKVTLDGINISELDP
SWLRGKAIGYINQEPVLFSGSVEENIKYGNPEASKQEVIKAAKLANADAFIQNFPDGYNT
IVGERGVSLSGGQKQRIAIARALLKNPSILILDEATSALDAESERLVQEALDHVMVNRTV
LVIAHRLSTIKNADVIAVMKGGRVVEVGNHKDLKKKGGIYSELIKLQESNE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccaatatatcagtttacttgttggtagacatgctttgaagttacgtttacct
gtcaatcaaacactattagtttcaaagtcgacgttacgaaatgcaaagcaaattttaaaa
gccgaatttcaaaaatgcacttggttaaagaataagaatatcaagcgtttggcacagttt
actgcgatcagtggtacagctatagtttcagtatctcaagccttaaagttaagcggttcc
catgtaatatgccacggattagaaaaaccgattgaagcagaaaataatgttgttgctaaa
gagttttcatggacagagttcttcaacgactatttgctgccagagattctacctcttagt
ctggcaattatgagtgctttggtgggtgcattcgttaacatgaagatcccgggtgccttg
ggggaacttattaatatattgaaccaacaagctcaaactggtttgtcaaatgtggctgat
tatatgaaaggacttcgtgaaccagtcatacagttaatggctctgtatttatgccagggg
ttcacaacctttctttatatttcattattgagccatctgggcgaaaatgtggcttgcaaa
ctgagaacaaacttatttaaaagttttctccagcaagatgttgcgtttcatgatgaacat
aagacgggggaacttattgatagacttacttctgatgttcaggatttcaagagttctttc
aagctgtgtgtatcgnaaggaatacgtagttccacccaaactgttggttgtatatgtagt
ttgtattctacctcacctaagttaaccctagcacttgctggtacaattccattgattgtt
ttgtttttatttccaggtcagctgatgtcgttcttggtatcggcacaaatgatccaacgc
tctttagcttcgttgtcggtgttatctggaacagctgtacgtggtgttactgctggtgga
agggtgtttgaatatatacacaaacaaccaagcatacccactcatggtggtcgtattatt
ccataccattgtttacttggacatttaaagtttgacgatgttcacttcacgtacccacaa
cgccagggccatgaagtattaaaaggagtctcacttgatattaagccatgccagactgtg
gcgttgtgtggattgtctggagcaggtaaatcaactgtggcaagcctagttgaaaggttt
tacgaccccacctctggtaaagtaactttagacggcataaatatttcggaactcgaccct
tcatggcttagagggaaagctattggttatattaaccaggaacccgttctattctctggt
agtgtggaagaaaacattaaatatgggaatccggaagcaagtaaacaagaagtgatcaag
gcggccaaacttgcaaatgctgatgcgtttattcaaaactttcctgatggttataatacc
atagtgggtgaaagaggggtctcgttatcagggggtcagaaacaaaggattgccattgcg
agggcactgcttaaaaatccaagtattcttatacttgatgaagcaactagcgccctggac
gccgaatctgagcgtttggtgcaagaggcgcttgatcacgtgatggtcaaccggacagtc
cttgtgatagctcaccgactcagcacgatcaaaaatgccgatgtcattgcggtgatgaaa
gggggaagggttgttgaggttggaaaccataaagatttaaaaaagaaaggaggaatttac
tcagaacttataaaactacaagaatccaatgagtga
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