Ciona intestinalis (yellow sea squirt): 100176195
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Entry
100176195 CDS
T01056
Name
(RefSeq) proteasome subunit alpha type-5-like
KO
K02729
20S proteasome subunit alpha 5 [EC:
3.4.25.1
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100176195
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100176195
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cin03051
]
100176195
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
100176195
Peptidases and inhibitors [BR:
cin01002
]
Threonine peptidases
Family T1: proteasome family
100176195
Proteasome [BR:
cin03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
100176195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
100176195
NCBI-ProteinID:
XP_002127299
Ensembl:
ENSCING00000009332
LinkDB
All DBs
Position
5:1986844..1989473
Genome browser
AA seq
273 aa
AA seq
DB search
MISQPFVIITYLPIYLTQNSFFLLLSYINVTMFMTRSEYDRGVNTFSPEGRLFQVEYAIE
AIKLGSTAIGIQTADGVVLAVEKRITSPLIEASSIEKVFEIDTHVGCAMSGLIADSKTMI
DRARVEAQNHWFTFDEKMRVQSITKAVSNLALQFGEEDSEPGAMSRPFGVALLFAGYDEG
LGPQLYHLDPSGTFVSCSAKAIGSASEGAQTSLEEQFHKSMTIEEAQKSILTILKQVMEE
KLTSTNVEVATVTKEQKFHVFSKEEIENAIKDL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgataagtcagcctttcgttataattacgtatttacctatataccttacacagaattcc
ttctttttgctgttatcttatataaacgttactatgtttatgacacgatctgagtacgac
agaggtgtaaacaccttctcaccagaagggagacttttccaagtagaatatgccattgaa
gcaattaaacttggatcaacggcaattggaattcaaactgctgatggagttgtacttgct
gtggaaaagcgaataacttccccattgattgaagcatccagtatcgaaaaagtctttgaa
attgacactcatgttggttgtgcaatgagtggattaattgctgattccaaaacaatgatt
gatcgtgccagagttgaagctcagaatcattggttcacatttgatgaaaagatgagagtt
cagagtattacaaaggctgtttcaaaccttgctcttcagtttggtgaggaggattctgaa
cctggtgctatgagtcgaccatttggagttgctttgttatttgctggttatgatgaaggc
cttggccctcaactatatcatttggacccatctggtacatttgtcagttgtagtgcaaaa
gcaattggctctgcatcagaaggtgctcaaacatcacttgaagaacaatttcacaaatca
atgacgattgaagaggcacagaagtctatacttaccattcttaaacaagtcatggaagag
aaacttacttctaccaacgttgaagttgccacagtaaccaaggagcaaaagtttcatgta
ttttcaaaagaggaaatagaaaatgccatcaaagacttataa
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integrated database retrieval system
