Ciona intestinalis (yellow sea squirt): 100176211
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Entry
100176211 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04120
Ubiquitin mediated proteolysis
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100176211
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100176211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176211
04121 Ubiquitin system [BR:
cin04121
]
100176211
03029 Mitochondrial biogenesis [BR:
cin03029
]
100176211
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100176211
Membrane trafficking [BR:
cin04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100176211
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
HECT type E3
100176211
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
100176211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
100176211
NCBI-ProteinID:
XP_009861388
Ensembl:
ENSCING00000003020
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MADEVTHGHNPQQEGSRLVRIQVLSGHNLAKKDIFGASDPYVSVSLYKPKRSASGSSKTI
TCVNTKTKKRTLNPSWNEKFLFRVVPRENRLLFEVFDENRLTRDDFLGQVDIPINASYIS
NDDETGTPHREFPLRPRSSKSRVKGHLRLKLSYADLPSTNDNNDDSPNEGDWELVDEETR
EGPVLPGGWEERQDHLGRTYYVHHETRRTQWQRPVVPPNPSTPETPSTSSDSDVTMGTAA
AAELFRQRRHISEDVTEQPRSSRNEDHSWEVISETSSTDPPTPPPLPRSPSLPSQAEMTS
SSVTTVDGELPDGWEARVDPKTNRKYFVDHVNKVTSWHKPRNITRTTSSSERKSATNSSQ
SSKYLPAGWEMKTAPSGRVFFIDHNRQVTSWDDPRTKRPPTSRGNFKNASEIGPLPDGWE
ERIHTDGRIFYVDHINHKTQWEDPRLQNPEITGPAVPYSRDYKQKYEFFKSKLHKSVSRD
IPNRFEMKVDRRTILNDSYRVISRVKKPEFLKSRLWIEFNKEKGLDYGGVAREWFYLLSK
EMFNPYYGLFEYSATDNYTLQINPNSGMCNEDHFDWFRFIGRVAGMAVYHGKLLDAFFIR
PFYKMMLGKPITLRDMESVDSEYYNSLKWILENDPTDLDLCFTVDEELFGQMKVNELKPG
GADIKVNNENKREYIQLVIKWRFVSRVQEQMKSFLQGFNELIPSNLVKIFDENEVELLMC
GLGDVDVNDWRRNTNYKGDYSANHIVIQWFWRAVLLMDPELRVRFLQFVTGTSRVPMNGF
GELWGSNGPQLFTIEKWGTPEKLPRAHTCFNRLDLPPYKSFEELRKKLLLAIESTQGFEG
VD
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaagtaactcatggtcacaatccacaacaagagggttctaggttggtaagg
atccaagttttatcgggacataatttagcaaagaaagatatttttggtgccagcgatcct
tatgtgagcgtgtcattgtacaagcctaagcgatcggcgagtggatcgtcaaaaacaatc
acctgtgtcaacacaaagacaaagaaacggacattgaatccatcttggaacgaaaagttt
ttgtttcgtgtggttccccgtgagaacaggttgttgttcgaagtgtttgatgaaaataga
ctgacacgcgatgattttctcggccaagttgacattccaataaatgcttcttacatttcc
aatgatgacgagaccggaaccccccacagggaattccccctacgaccccgaagttccaaa
tcaagggtcaaaggtcatttgaggttaaagttgtcctacgcagatcttccctcgaccaac
gataataacgatgactcgcctaacgagggagattgggaattagttgatgaagagacacga
gaaggtcccgtgttgcctggaggttgggaggaaagacaagatcatctcgggaggacgtat
tatgttcatcatgaaacaagaagaacgcagtggcaacgacctgttgtcccccccaaccct
tcaacaccggaaaccccctccacttcatcggatagtgatgtcacaatgggcacggcagcc
gcagccgaattgttccgacagcgtcgacatataagcgaagatgtgacggaacaaccaagg
tcgtctcgtaatgaggatcatagttgggaagtgatatcggaaacctcatcaaccgaccct
ccgaccccacctccattaccaaggtcaccaagtctacctagtcaagcggagatgacatca
tcaagcgtaacaacagtagacggggaactcccagatggttgggaggcgagagtcgacccg
aagacaaatcggaaatatttcgttgatcacgtgaataaagtcacgtcatggcataaacca
cggaatatcacgcgaaccacatcatccagcgaacgcaaatcagccacaaattcttcgcaa
tcatcaaaatatcttccagcggggtgggaaatgaagactgccccaagtggccgagtattt
tttattgatcacaatcgacaagtaacgagttgggacgacccgaggacgaagcgaccacca
acaagtcggggaaattttaaaaacgcgagcgagatcggaccattgcctgatggctgggag
gaacggattcacaccgatggaaggattttttacgttgatcatatcaaccacaaaacgcaa
tgggaggacccacgattacaaaaccccgaaataactggcccggccgtcccttactccaga
gattacaaacaaaaatatgaattcttcaaaagcaaacttcataaatcagtttcgcgcgac
attccaaatcgtttcgagatgaaagttgatcgtcgaactattttgaatgattcatatcga
gtgattagtcgcgttaagaaaccagagttccttaagtcaaggctgtggattgaatttaat
aaagagaaggggttggattatgggggcgtggcgagggagtggttctatttactatcgaag
gaaatgtttaatccatattatggattgtttgaatattctgcaaccgataattacacgtta
caaatcaatccgaactctggtatgtgcaatgaggatcattttgattggttccgatttatc
ggtcgcgttgcagggatggctgtttaccacggaaagttacttgatgctttcttcattcgt
ccgttctacaagatgatgttggggaagccgatcacattgagagatatggagtccgtggac
agcgagtattacaactcgttgaaatggatcctcgaaaacgacccgaccgatcttgacctt
tgtttcacggtggatgaagaattatttggtcaaatgaaagttaacgaactgaaacctgga
ggggcggatatcaaagttaacaacgagaacaaacgagaatatattcagttggttataaag
tggaggttcgtatcgcgagtgcaagagcaaatgaagtctttccttcagggtttcaatgaa
cttatcccaagcaacctggtaaaaatatttgatgaaaatgaagttgaattactgatgtgc
gggctcggcgatgtcgatgtcaatgattggagaagaaacaccaattataaaggagattac
tcagcgaatcatatcgttattcagtggttttggagggcggtgttgttaatggacccggag
cttcgagttcgattcttacaattcgtgacggggacctctcgagttccgatgaacgggttc
ggagaattgtgggggagtaacggaccccagttatttaccatcgagaagtggggaaccccc
gagaagctgccccgagctcatacatgtttcaacaggctggatttgccgccgtataaaagt
tttgaagagttgaggaagaagttgttgcttgcgatcgaaagcacgcaggggttcgagggg
gtggattaa
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