KEGG   Ciona intestinalis (yellow sea squirt): 100176302
Entry
100176302         CDS       T01056                                 
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03272  Virion - Hepatitis viruses
cin04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100176302
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    100176302
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cin03037]
    100176302
   04147 Exosome [BR:cin04147]
    100176302
Cilium and associated proteins [BR:cin03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100176302
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100176302
  Exosomal proteins of colorectal cancer cells
   100176302
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like Trp_oprn_chp
Other DBs
NCBI-GeneID: 100176302
NCBI-ProteinID: XP_002130616
Ensembl: ENSCING00000023118
LinkDB
Position
11:complement(14819..17834)
AA seq 221 aa
MGSAAIEVTSLILFTIGTILGVVSVAIPYWKKNDPEDTIRDSIVRHEGLWIKCQTFNTGN
WDCDDFNRFFLGLPTELQAARGFGITSIVFGILAIIAMVLGMDSLPCGGDVKGLKKRVRL
IGGSIGFLSGLLLIAAVSWYANDIRIAHEFASQQLLLNSSTTITRYIFGEALFIGWIAGA
LLVLGGILAMCTGCGGESYDDAPRNYVYRPPKSAGNSQEYV
NT seq 666 nt   +upstreamnt  +downstreamnt
atgggtagcgctgctattgaagttacttctcttatattgtttactattgggacgatccta
ggggttgttagcgttgcaattccttattggaagaagaatgatccggaagatacgatccgg
gacagtatcgtcaggcacgaagggttatggatcaagtgccaaacctttaacactggaaac
tgggattgcgatgatttcaacagattcttcctcggcctcccaaccgaactccaagcagcc
cgtggattcggtatcacatcaatcgtgttcggtattctagccatcatcgctatggtattg
ggaatggactctcttccatgcggtggcgacgttaagggcttaaagaaacgtgttcgatta
atcggggggtcgattgggtttctatccggtcttctcttgattgcagccgtttcctggtat
gctaatgacatcaggattgcccacgaattcgccagccaacagctgctactcaactcaagc
acaacaattacaagatacattttcggagaagctcttttcatcggttggatcgcaggtgct
ttattggtgctgggtgggatccttgctatgtgtacaggatgtggcggagaatcgtacgac
gatgctccaagaaactacgtgtacaggccaccaaaatctgccggaaacagtcaagaatat
gtctag

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