Ciona intestinalis (yellow sea squirt): 100176319
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Entry
100176319 CDS
T01056
Name
(RefSeq) serine/arginine-rich splicing factor 1B isoform X2
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100176319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100176319
Spliceosome [BR:
cin03041
]
Common components
Common spliceosomal components
SR proteins
100176319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100176319
NCBI-ProteinID:
XP_009859357
Ensembl:
ENSCING00000007375
UniProt:
A0A1W2WNG5
LinkDB
All DBs
Position
8:4303508..4305945
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AA seq
235 aa
AA seq
DB search
MSSRDDVDCRVYVGNLPPDVREKDVEDLFYKYGSIRHVNLKNRRGPPFAFVEFEDRRDAE
DSVHGRNGYNFDGYKLRVEHPRGNGPSQRPAYGMSSFRARGGPPSRRTDFRVMVSGLPPT
GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVNRDDMQFAVKHLDDTKFRSHEGETAYIR
VKIDGSQSPRRLRSRSRDRERRRSPSYSPRYRSRSRSISPQRRSYSNSPRRSRSR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcgtgatgacgttgactgtcgggtatatgttggtaatctcccacctgatgta
agagaaaaagacgtggaagacttattttacaaatatggttctatccgccatgttaatttg
aaaaatcgcagaggtccaccatttgcatttgttgaatttgaagatagaagggatgcggaa
gattcagttcacggtagaaatggttacaactttgatggatacaaacttcgagttgaacat
cctcgtggaaatggtccttcccaacggccggcatatggaatgtcaagtttcagagcaaga
ggggggccgccttcacgaagaacggattttagagttatggtgtctgggcttcctccaact
ggcagttggcaggatttaaaagatcacatgagagaagctggtgatgtgtgttatgctgat
gtttatcgtgatggaactggagttgttgagtttgtcaaccgagatgacatgcaatttgct
gtcaagcatctggatgacacgaagtttcgttctcatgagggtgaaactgcttatatccga
gtaaagatagatgggtcacagtctcctagacgattaaggtctcgcagtcgtgatcgtgag
cgtcgtaggtctccatcctattcgccaagatatcggtctcgttctcggtcaatttcacca
caacgtcgttcatattccaattctcctcgcagatctcgttcgcgttga
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