Ciona intestinalis (yellow sea squirt): 100176330
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Entry
100176330 CDS
T01056
Name
(RefSeq) solute carrier family 22 member 5-like isoform X1
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100176330
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
100176330
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
100176330
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
DUF2721
Motif
Other DBs
NCBI-GeneID:
100176330
NCBI-ProteinID:
XP_018667326
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Position
4:complement(3289272..3292544)
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AA seq
528 aa
AA seq
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MKNDNHKIRCAPENTGISLSNPDEVLFGKRAKQRLPVLAIMCSFVSFSIFAPIFVTYTPK
HYCKSNSWNTSNGIKVNGNVTKCHRLSWISNSTEMENITLYEYESCPGELVYDRSQGNSM
TIEFNLVCDSSWKKPVVASSILLGYFIGSIIGSPISDRYGRKTILVASIIIYAISSLFCS
FSVSFLMVLSSLLFVGISTLIMYYTAFILAQEMVPVNKKAIAATAMNLGYISGYLFLTLS
FYLIRDWRWLYRLTSIISAVYFIPFLWFVPESPKWLLNNKSKQNSTTFKTKKLQDLEDKD
VNTGQLDSRVRRCCRFKLLQNSILVKRCALICLMWIVCNLGFYILNLNTSNLGGSIFVNS
LVVGCVGMASYLCAMVWLKKVGRRKSFACSLTLSSIFCICSPSMKIVHITAGMVFSMVGI
HFMTTSISIAVVWAGELFPTSLRNSYLGLASLSSSVFTIATPFVVYAGEELSYSIPFYIA
GCLGAVTVVLSLLLPETLETDLPNTTEEAMALESKRMKIFQQLRFGKA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgacaatcacaaaattcggtgtgcgccagagaatactggtattagtttatca
aacccagatgaagtgttgtttggaaaacgagccaaacagagattacctgttcttgctata
atgtgttcttttgtctcgttctcaatatttgctccaatttttgtcacctatactccaaaa
cattactgcaagtcaaacagctggaacacctccaatggaatcaaagttaatggaaatgtg
acaaaatgccacagattatcctggatttccaatagtactgaaatggaaaacatcactctg
tacgaatatgaatcgtgtcctggtgagttggtatacgataggagtcaaggcaacagtatg
acaattgagttcaatttagtttgtgattcatcatggaaaaaacctgttgtggcatcatca
atcttactgggatatttcattggttctataataggttctccaatttctgataggtatgga
agaaagacaatattggttgcatcgattataatttacgccatttccagtttgttctgctca
ttttcagtttctttcctaatggtgttaagcagtcttttgtttgttggtatcagtacactc
attatgtactacaccgcatttattttagcacaggagatggtgcctgtcaataaaaaggca
attgcagctactgccatgaatttgggttacatttctgggtatctatttctcactttaagc
ttctatcttattcgagactggagatggctgtatcgtctcacttcaattatttctgcagtt
tatttcatcccttttttatggtttgttcctgaatcaccaaagtggctgctcaataataaa
tcgaaacaaaattcaacaacttttaaaactaagaagttgcaagaccttgaagataaagat
gttaacaccggacagttggacagcagggtccgcagatgctgccgtttcaaattgttacaa
aattcaattcttgtcaaacgctgtgctttgatttgccttatgtggattgtatgtaacctt
ggtttctacatactcaacttaaacacttctaacttgggtggaagtatttttgtcaacagt
ctggttgttggttgtgtgggaatggcctcctacctatgcgctatggtctggctaaaaaaa
gttggaagaagaaaatcatttgcatgctcactaacactatcctcaatattttgtatatgt
agcccttccatgaaaatagttcacataacagctggaatggtgttttccatggtgggaata
catttcatgaccactagtattagtatagcagtagtttgggcaggtgaactgtttccaact
tcacttagaaacagctacttaggcctagcttctctttcgtcttctgtgtttacgattgcc
actccatttgttgtatatgctggagaggaattaagctactctattccattctacattgct
ggctgtttgggagcagtgacagtagtcctatctcttctgcttcctgaaacattagaaact
gatctaccaaacacaacggaagaagccatggctttggaaagcaaaagaatgaagatattc
caacaactgaggttcggaaaagcttaa
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