Ciona intestinalis (yellow sea squirt): 100176349
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Entry
100176349 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100176349
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00500
Starch and sucrose metabolism
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100176349
Enzymes [BR:
cin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
100176349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
100176349
NCBI-ProteinID:
XP_004225607
LinkDB
All DBs
Position
1:3300357..3313904
Genome browser
AA seq
1022 aa
AA seq
DB search
MRLNFAVGFMLITAVIAQEPESVDWNATPPIPTQPRTSQPNSEPNTRTEASTAASVAPSV
VSIPENINYVTEPPYNYAEALAKSMLFYEAQRSGSLPPNQRVRWRGNSAMNDGSDNNIDL
SGGYYDGAGYIKYNFPMAFSSTLISWSVIRYGRTYRALGQYNHALDTIKWATDYFIKCHP
EPNLFYGQVSDKSADSQFFGRPEDMTYQRRSYKIDFTQPGTDLAAEAAAAMASAAIVYKT
VNPSYSNTLQQHAVELYNFATTAPRRPYSRSIRHAAQAYGTEASSYKDELAWAALWLYKL
TRLPVYLNDAKRIVNLLDESRRRPLLNVVTEFSWNVKTAGVQLLLSEMTNTRRFKAAFKL
FCTHAQPEQSSNLLSRSDYTNRGLLYVNQWGPLRYAANTAFICAMAADNNVDTERNRVLA
QNQLNYILGSNGRSFVVGFGTNPPTKVFHQSSYCPPPPAACNRFDAETPNAHILYGALVG
GPSESDSFMNQRMNQKQSSVTLDYNAGYQATLAAVLDLYIFGEGNRPDQDGTVSVVSTTT
TATTTAATVSAVSSQLNSFNLSEVLNKSLLFYEAQRSGVLPYDNRISWRGDSLISDGMPN
FNMTGGYYDGVSNVKFHFPMAFSMTMLAWGIIEFKDAYEAAGQYDYALDALKWGTDYIEK
MIINRTIVGQVGDPSTDGRLWERPEELSATRPVYTLSGNLRGTDLAAEISAALAAASIAF
EPKDAALSSRLFNKARHVYHDIARQTPYVKYSSSILSGPNYYPSSGYEDELEWAAIWFYK
KTKRPIYKNRAKAHYMAHSREFSWDVKSAAVQLLVDESERQSLYPRVATYCNWLLNDADK
TPDGLLILHERYPAKYAANAAFLLMLAYRKFPNAQNAKGWRDAGIRQISYLLGGNKKRQS
FVVGFGRISPTQPLHKGSSCPLPPNRCGHTFKNRDQPNPNILYGALVGGPTPLDDFSDLR
TEEEQSRVSLDANAGFQAAVAGIIHLKLNQLLSSGCITTVSVQLVFLSFFFTYFITHILR
FD
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaaactttgctgttggttttatgctcattaccgcagtaatcgctcaagaacca
gagagcgtagattggaatgcaacaccaccaattccaactcagccgagaacatctcaaccg
aacagtgagccgaatactcggaccgaggcatctacagcagcaagtgtggcaccttctgtg
gtttcaattccagaaaacatcaattatgtaactgagccaccgtacaactatgctgaagct
ttagcgaagagcatgttgttttatgaagcacaaaggtccgggagtctaccgcctaaccaa
cgagtaagatggcgcggaaactctgcaatgaacgatggcagtgataataacattgatctt
tctggaggatattatgacggcgctggttatataaaatacaattttccaatggcgttctct
tctactttgatatcatggagtgtgatccgctacggaagaacttacagggctttgggtcaa
tacaatcatgcacttgatacaatcaagtgggccaccgattacttcataaaatgtcaccca
gaacccaatttgttctacggccaggtcagtgataaaagtgcagactcccaatttttcggt
cgaccagaagatatgacttatcaaagacgatcgtacaaaatagatttcacccaaccagga
acggacttagctgctgaagctgcggccgccatggcgtcagctgctatcgtttacaaaaca
gtaaatcccagttattccaacactcttcaacagcacgcagtggagttgtataattttgct
acaactgcgccccgtcgtccatatagcagatcaatacggcacgccgcacaagcttacgga
actgaagccagcagttataaagatgaacttgcatgggcggctctctggctttataagctt
acacgattgccagtttacttaaatgacgcgaaacgaattgtaaaccttttggacgaatca
agaaggagacctctacttaacgtggtcaccgagttttcatggaatgtcaaaacagcgggt
gttcagttactgttatcggaaatgacaaatacccgaagatttaaagcagcatttaaattg
ttttgtacacatgcccagccagagcaaagctcaaatttgctatcgaggtcggattacacg
aatagagggttgctatacgtaaaccaatggggtccgcttcgttatgctgcaaatactgcg
tttatttgcgcaatggctgcggataataatgtggatacggaacgcaacagagttctcgca
caaaaccagttgaattacattctcggatcaaatggcaggagtttcgtggttggctttgga
actaaccccccaacaaaagtttttcatcaatctagttactgtccgccaccacccgcagct
tgcaaccgttttgatgcggaaacaccgaacgcgcatattctctacggggctctggtaggt
ggaccaagtgaaagtgacagttttatgaatcaacgaatgaaccagaagcagagcagtgtc
acacttgattacaatgcaggataccaagccacactagctgctgtgctggatttgtatatt
ttcggagaaggtaatcgaccggatcaagatgggaccgtttctgtagtgtcaacgacaaca
acagcaacaacaacagccgcaacagtttccgcggtttcttcacagcttaatagtttcaat
ctaagcgaagttttaaataaatccttgctgttttatgaagctcagagatcgggagttctc
ccatatgataatcgaatatcatggaggggcgattcccttattagcgatggtatgccaaac
tttaacatgacagggggttattacgacggggtaagcaacgtcaagtttcattttcccatg
gccttttctatgacgatgctggcgtggggaatcatcgaattcaaagatgcatacgaagct
gctggacaatacgattacgctttggatgcattaaaatggggaacagattacattgaaaaa
atgattataaacaggacaattgttgggcaagttggcgatccttcaacagatggccgtttg
tgggaacgaccggaagaactatccgcaaccagaccagtttacactcttagtggcaatctt
cgtggaactgatcttgcggcagaaatttcagcagctcttgccgccgcttcaattgcattc
gaaccaaaagatgctgctctttcatcgcggctttttaataaggcaagacatgtgtaccac
gatattgctcgacaaactccttacgttaaatattcaagttctatcctgtcaggaccgaac
tactacccttcttctggatatgaggacgaattggaatgggctgctatatggttttataaa
aaaacaaagagaccgatctacaaaaacagagcaaaggcacattacatggcccattcaaga
gaattttcatgggacgtaaaatcggctgcagtacagctgcttgtcgatgagtcagaacgg
caatcgctttatccacgagtagcaacgtattgtaattggcttttgaacgacgctgataaa
actccagatggtctactaattttgcacgaacgttacccagcaaaatatgcagcaaatgct
gcatttcttttgatgctcgcctacagaaagttcccaaatgcccaaaatgccaagggctgg
agagatgcaggaataaggcagattagctacctccttggtggtaataagaagagacaaagt
ttcgttgttggttttggaagaatatcacccacacaacccttgcataagggaagctcgtgt
cctctaccacccaatcgatgtggccatacttttaaaaatagagatcaaccaaatccaaac
attttatatggagcattagttgggggcccaactcccttagacgactttagcgatctgaga
acagaagaagaacagagtcgagtctccctagatgcaaatgctggatttcaagcagcagtt
gctggaataattcaccttaaactcaaccaattactcagcagtggttgtataacaacagtg
tccgtacaactagtttttctttcattcttttttacatacttcataactcacatacttcgt
tttgattaa
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