Ciona intestinalis (yellow sea squirt): 100176356
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Entry
100176356 CDS
T01056
Name
(RefSeq) SNARE-associated protein Snapin-like
KO
K20002
SNARE-associated protein Snapin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176356
Membrane trafficking [BR:
cin04131
]
SNARE
SNARE associated proteins
Others
100176356
Endosome - Lysosome transport
Arf GTPases and associated proteins
BLOC-one-related complex (BORC)
100176356
Others
BLOC-1 complex
100176356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snapin_Pallidin
Vac_Fusion
Eisosome1
DUF489
Laminin_II
DUF1351
Hyccin
Vip3A_N
RIF5_SNase_1
RIH_assoc
ROS_MUCR
Fib_alpha
YwqH-like
DASH_Duo1
DUF16
Motif
Other DBs
NCBI-GeneID:
100176356
NCBI-ProteinID:
XP_002124048
Ensembl:
ENSCING00000021184
UniProt:
H2Y1M8
LinkDB
All DBs
Position
8:complement(6047815..6048912)
Genome browser
AA seq
133 aa
AA seq
DB search
MADSNTDHTTTDGNETANGICGVIKPVVQRIDNQVEAVRKSQLELRVKIEEVSSDLQRIS
EEQPVNVNFDPYIRRLINSKRRVTLINNIIQNVHDRLERLQRNAEQETNRVKTIVQAESA
LINVTQGVTGDPS
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctaatactgaccacaccactacagatggcaatgaaactgcgaatgggatt
tgtggagtaataaaaccagttgtgcaaagaattgataatcaggttgaagcagtaagaaag
tcccagttggagctgagagttaaaatagaagaagtttcatccgatcttcagcgaatcagt
gaagagcagcctgtgaatgtgaactttgacccttatattcgtcgccttataaactcaaag
cgacgagttacacttattaacaatataattcaaaatgtccatgaccggttggaacgatta
cagcgtaacgcggaacaagagacaaaccgtgtaaaaacaattgttcaagctgaatctgct
ttaattaatgtaacacagggggttactggtgatccttcataa
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integrated database retrieval system
