Ciona intestinalis (yellow sea squirt): 100176370
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Entry
100176370 CDS
T01056
Name
(RefSeq) sodium- and chloride-dependent transporter XTRP3-like isoform X2
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100176370
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100176370
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
100176370
NCBI-ProteinID:
XP_002126250
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Position
7:complement(842260..849315)
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AA seq
626 aa
AA seq
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MVKHDLEEQRCMVSSDKDSSELQVLNDKETGVIESGSKESSKDKTRQSWNNKTEYILTSL
GNAVGLGNIWRFPYKCHKHGGGAFLIPYAIMLLVVGYPLLLMEYSMGQRAKKGAIGVWSR
VSPYTTGIGIASLVVCLVLGLYYNVILSLAFFYTANSFRFPLPWESCPVTYSGINMTATI
VQECADSSPTSYFWFRETLDVPVTIDQGGELNWWVVAASFVAWFALFIGLVRGTSSTGKV
MYFAVFFPYIVLTAFAIRTILLDGAAAGIAYLFRPDIEKLKNPAAWLDALTQIFFSIGLG
QGTYIAFASYTTTHNNCIFDTIFVATVNSFTSLFVALIVFGVMGFKAVANSKLCLARNEV
TLQRMNATLNGTLTNDNVNMTTLNSAFNGTFGNGTDLLQDCSPAKELGSIPGGTGLAFIS
FCDAILKFPGSNFWSVLFFFMIVNIGLGSVLGNFTGIVSLIRDLGCKISKAKLALLLCIV
MFIIGLTLTTKKGIYLVEIFDDVYVGTGLLYIVLCETFAVAFLYGIKRLGNDIHFMTGQR
LNIYWKTCMQFLCPILLLGCFGTIVVSYIIKSPIYHAWDGTGIVKMTYPAWVSALVAILL
VLTTLSVPLVALLHRLRVYDFSKFAE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagcacgatttggaagagcaacgctgcatggtatccagcgataaagacagctcg
gaattacaagttctaaacgacaaggaaactggagtgattgaaagcgggtcgaaagaaagc
tccaaggataagactcggcagtcatggaacaacaagactgaatacattctgacatctctt
ggaaatgctgttggacttggtaatatctggaggtttccgtacaagtgtcacaaacatggc
ggaggtgctttcctgattccttacgccataatgttactggtggttggttatccgcttctc
ttaatggaatactccatgggccagcgggctaagaaaggagcaattggcgtgtggagtagg
gtcagtccctataccaccggtataggcatagcatcacttgtggtgtgtttagttcttggt
ttgtactacaacgtcatactctccttggcattcttctatacagccaactcgttccgtttt
ccacttccgtgggagtcgtgcccggtaacctattccggtattaacatgacggctacgatt
gtacaagaatgcgctgattcatctcctacatcatatttctggttccgagaaaccctggat
gtgccagtaaccatcgatcaaggaggggagctgaactggtgggtggttgccgcttcgttc
gtcgcgtggttcgctctgtttatcggacttgttagaggtacatcgtccaccggaaaggtc
atgtactttgccgtcttctttccgtacatcgtgttgacagcgttcgctattcgaacaatt
ctattagacggggcggcggccggtatagcctacctctttagaccagacattgaaaaactg
aagaacccagcagcctggctcgacgctttaactcagatcttttttagtattggtttgggc
caggggacctacatcgcgtttgccagttacaccacaactcacaacaactgcatctttgat
accatctttgtagcaaccgtaaatagctttacgtcactcttcgttgcactcattgtgttt
ggtgtcatgggatttaaagcggtcgctaactcaaagctttgcctcgccagaaacgaggtg
acactgcaaaggatgaatgcaactttaaatggaaccctgacaaacgataacgttaacatg
acaactctaaacagtgccttcaatgggacttttggaaacggtacggaccttttacaagac
tgctcgcccgccaaagaactcggctctatccccggcggtacaggtctcgccttcatttcg
ttttgcgacgccatcttgaaatttccgggctcaaacttttggtctgtccttttcttcttt
atgatcgttaacatcgggctgggaagcgtgttgggaaactttactgggattgtgtcttta
attcgagatctgggatgcaagatttcaaaggctaaactagcattattgctatgcatagtt
atgttcattattggtctaactttgacaaccaagaaaggaatttatctggtcgaaatattt
gatgacgtgtacgtaggcacgggacttctgtacattgttctttgtgaaactttcgccgtt
gcctttttgtacggtattaaacggttgggaaacgacattcactttatgaccgggcagcgc
ctgaacatttactggaagacatgtatgcaatttctctgccccattttgttgctgggttgt
ttcggtaccatcgttgtctcctatatcattaaatctccaatataccacgcgtgggacggg
accggtattgtcaaaatgacttatccagcatgggtgagcgccttggtcgccatcttgctt
gttctaaccacacttagtgtcccgctggtggcgctgttgcacaggttaagggtgtacgac
ttcagtaaatttgccgaatga
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