Ciona intestinalis (yellow sea squirt): 100176379
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Entry
100176379 CDS
T01056
Name
(RefSeq) F-box/WD repeat-containing protein 10-like
KO
K10266
F-box and WD-40 domain protein 10
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100176379
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100176379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_SCAP
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
Beta-prop_WDR90_POC16_2nd
F-box
F-box-like
Beta-prop_DCAF12
Beta-prop_IFT140_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_like
Beta-prop_IP5PC_F
GH101_N
Motif
Other DBs
NCBI-GeneID:
100176379
NCBI-ProteinID:
XP_018668012
LinkDB
All DBs
Position
7:3837850..3846827
Genome browser
AA seq
729 aa
AA seq
DB search
MLITKLPRVKLKMNAPTHTVLKRTHAWILRSDVHAVRDFMLGIIKRVPSLDILHQTARIL
SSLLSKDYIYARSQSNSSCIEMKEFVSCNMGMIQQEEISSIYEWFTNSDNMKKKHFILQL
VRMVADPSILYDVCQLCQSRCCELKRHEEIISEVTGSGDHQTYIPTSNSVQFSHLNFVES
SLTVPDDKYGRLSNIPSSTSSSCFIIPCVDFISKLPVHLAKQILSCLNSKDLSSSSCVSN
AWNKLTHEVKLENYILHEMKEESILMQGVSAKGIQANFAKKRTLMLPVVSEQDETFISEG
DLTTKKLDFDFTDIGLPLTPTLVEERNIFCGAYNVLVVNHHSDRHRVIDYDGGNSLIMGS
NDRTVKIIDIRSGQLCQPPIQGHPGYITTVHMKKNNFYSGSYDTTIRCWGVGSSGCKQIL
TGHRKSIVSIDSCENILVSGSKDGRLKAWDLSSGKCKCTFKHSEQSILTCVKILGDIVIS
SCDRGKVKVWDLSTRKLVKTLRHRCGINSVCCDAYYIITAGDDGYALAWVKPGKVKKCLK
SYRHPRKVLCVALSFQRLITGCEDGKLRVIHLQTGECMRALRGNSNCDPILSLCCYTNNL
IGGDRIVVNTTSNILLLQFEPISWNYEAQDNKEDEKLFKVERQVRPLTCTQYPYTRACRS
RLSLSSATSKTARSTSGSRPNTACSATFQSSWKRPQSCYTEPRSVHSRISSRCQSSMSCT
SSATNTSKY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacaaaattgccacgggtaaaattaaaaatgaatgcaccaactcatacagta
ttaaagcgtacacatgcatggattttacgttccgacgtgcatgctgtaagagattttatg
cttggaattattaaaagagttcctagcttagacattttgcatcaaactgcccgaattttg
tcatcgctattaagcaaagattatatttacgctcggtcacaatctaactcaagttgcatt
gaaatgaaagagtttgtttcgtgtaatatggggatgatacagcaagaagaaatatcttca
atatacgaatggttcacgaacagcgacaacatgaagaaaaaacattttattttacaactt
gttcgaatggttgctgatccaagcatactatatgatgtttgtcagctgtgtcaatcaaga
tgctgtgaactcaaaaggcacgaagaaattatttctgaagtaacaggttcaggagatcac
caaacttacataccaacatctaattcagttcaattcagtcatctaaactttgttgaatct
tctttaactgttcctgacgataaatacggaagattaagcaacatcccatcatcaacatca
tcttcttgttttatcataccttgtgttgattttatatcaaaacttcctgttcatcttgct
aaacaaattttaagttgtttaaattctaaagatctttcttcatcatcatgtgtttcgaac
gcatggaacaaattaactcatgaagtcaaacttgaaaattatattcttcatgaaatgaaa
gaagaatctattcttatgcagggtgtttctgcaaaaggtattcaggcaaattttgcaaaa
aaacgaacactaatgctgcccgttgtttcggaacaagatgaaacatttatcagtgaaggt
gacttgacgacaaagaaacttgactttgatttcaccgacattgggttacctttaacacct
acattagttgaagagagaaatatattttgtggagcgtataatgttcttgtggttaaccat
cattcagatcgtcatagagtaatagattacgatggtggtaactcacttataatgggatcc
aacgatcgaactgtgaaaattatcgacattcgatctggtcagttgtgtcaaccccctatt
caaggacacccaggttacataacaactgttcatatgaaaaagaacaatttctacagtggt
agttatgacacaacaataagatgttggggtgttggatcaagtggttgcaaacaaattctg
accggacatcggaagtcaatcgtttcaatcgattcgtgcgaaaatattcttgtgtctggt
tctaaagatggtaggctgaaagcatgggatttatcaagcggaaagtgtaaatgcacattc
aaacattcagaacaaagtattttaacttgtgtgaagatacttggagacattgtgatcagt
tcatgcgacagagggaaagttaaagtgtgggatctttctacaagaaaactggttaagacc
ttacggcaccgatgtggaataaacagtgtttgttgtgatgcatattacataataacagct
ggtgatgatggttatgcattagcgtgggtgaaaccagggaaggtaaagaaatgtctcaaa
tcgtatcggcaccctaggaaagtcttgtgtgtggcattgtcattccaacgactcatcact
ggctgtgaagatggaaaattgagagttattcatctacaaacaggagaatgcatgagagct
ttaagagggaacagtaattgtgatccgatactttcattatgttgttatactaacaatcta
ataggcggagatagaattgtcgtgaacacaacaagcaacattctcctgcttcaatttgaa
ccaatatcatggaattatgaagcccaagataataaagaggacgaaaaattgtttaaagta
gaacgacaagtcagacctctaacatgcacacagtatccatacacaagagcatgcagaagc
agactttctctatcatcagccacctctaaaactgcccgttcgacgtctggtagtcgacca
aacactgcttgttctgctacgttccaaagttcatggaaacgaccacaaagctgttacaca
gaaccaagatcagttcattcaaggatttcgtcaagatgtcagtcttccatgagttgtaca
tcatctgcaaccaacacttccaaatactga
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