Ciona intestinalis (yellow sea squirt): 100176467
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Entry
100176467 CDS
T01056
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176467
Membrane trafficking [BR:
cin04131
]
Protein recycling
Others
EARP complex
100176467
Endosome - Golgi transport
Tethering complex
GARP complex
100176467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
100176467
NCBI-ProteinID:
XP_002124423
Ensembl:
ENSCING00000003665
UniProt:
F7AD97
LinkDB
All DBs
Position
7:complement(201050..208145)
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AA seq
694 aa
AA seq
DB search
MNEAEALDFAINLENFDLSSEDALDNVDEHIQENLEDDLVKKALESGVDLREYAKQIEQD
LQAVENTSIADYVTESVNIARLHTRIGECDGILERMESMLHGFQHDLSSISAEIQCLQEQ
SVLMNIKLKNRQAVKSELSQLVDEMAVPELMINQILDCPVTERAFLEQLHELNHKINFIK
QHSYNETAACRDVQDVTEKLKFKAIAKIREFLLTKIYSFRKPMSNYQLGQDAMLKNRFFY
EFLLSNERHVAREVRDEYVDTLSKVYLSYFKTYVNRIMKLQFEESAGREDLMATEDSSRK
GFFSSSKPAMRNRSTVFTLGKRDEILKEKLESPIIVPHAAQKSESKHSFESLFRSQHYAL
LDTCCREYLFLCDFFMLSSSAAQDLFNAILGKTLALFLKHVDTHCSECHDAIALFLCIHI
VYKYQVIMTSRDVTSLDNYWDTVKAILWPRFEHLVKMHTRSIVDCNVHNLSSIDIRPHYI
TRRYAEFSAAVVRINENYPNPKVEQVLSQLQTEVQNFILRLAACFSDRKDQLVFLINNYD
MMLSVLMEKTTEDSKESESFQQLLNSRTQEYVEEILAPHFGGMMAFVKDCEVVLESGQTD
RLKVFEQKVVPLVQGFAAGWRTSVDLISREVTRSFTNFKVGSTIVQAAFTHLIQYYHRFQ
KLFTQHPFKTMPAKSDLVNMHLIMVEMKKYKPNF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagctgaagctttagattttgcaataaatctagaaaactttgacttatcttca
gaagatgcgcttgataacgtggatgaacatatacaagagaatttagaagatgatttagta
aaaaaagctttagaatcgggagttgatttgcgtgaatatgcaaaacagattgaacaagat
ttgcaagctgtcgaaaacacttcaatagcggattatgttactgaaagtgttaatatagct
cgattgcatacacgaataggagaatgtgatgggatattggagagaatggaatcaatgttg
catggttttcaacatgatcttagcagcatcagcgctgaaattcaatgcctacaagaacaa
tctgttttaatgaatatcaagttaaagaaccgacaggctgtgaaaagtgaattaagtcaa
ctggtggatgaaatggctgtaccggaactaatgataaatcaaatcttggattgcccagtg
acagagcgagcatttctagagcagcttcacgagttaaaccataaaataaacttcattaaa
caacattcatataatgaaacagctgcatgtcgagatgtgcaagatgttactgaaaaatta
aagtttaaagcaattgcaaaaattcgtgaatttcttctaactaagatttattcttttcgc
aaacctatgagtaattatcaacttggtcaggatgccatgttaaaaaacagattcttttat
gagtttttgctttcaaatgagcgtcatgttgcacgtgaggtacgggatgaatatgttgat
acactgagtaaagtttatctatcatatttcaaaacttacgtcaacagaatcatgaaactt
cagtttgaggagtcagcaggtcgtgaggatttgatggccacggaagattcatcaagaaaa
ggattcttctcttcatctaaaccagccatgcggaaccgatcaacagtttttacactcggg
aagcgcgatgagatccttaaggagaaattggaatcaccgatcattgtccctcatgctgca
cagaagagtgaaagcaaacattcctttgaaagtttgtttcgaagtcaacattatgctctg
cttgatacttgctgtcgtgaatatttattcttgtgtgatttcttcatgttaagttcatct
gcagcacaagatttatttaatgcaatcttgggaaagacattagctcttttcttgaaacat
gttgatacacattgttctgaatgccacgacgcaattgctctgttcctatgtattcatatt
gtgtataaataccaggtaatcatgacttcacgagacgtaacatcacttgacaattactgg
gacaccgtgaaagcaatattatggccacgttttgaacacttggtaaagatgcataccagg
agtattgtggattgtaatgttcataatctttcatctattgatatcagacctcattatatt
acacgccggtatgctgaatttagtgcagctgttgtaagaattaatgaaaattatccaaac
cccaaagttgagcaagttttaagtcagcttcaaactgaggttcaaaacttcatacttcgt
cttgctgcatgttttagtgatagaaaagatcaacttgtcttccttataaacaactatgac
atgatgctgtcggttttaatggaaaaaacaacagaagattccaaagaatctgaaagcttt
caacaattgctcaacagtcgaacacaggaatacgtagaggaaatattagctcctcacttt
ggtggaatgatggcatttgttaaggattgtgaggtggtattggaatctggtcaaacagat
cgactcaaagtatttgagcaaaaagttgttccgttggttcaagggtttgccgctggatgg
cgcacaagtgttgatcttataagtcgagaagtcactcgatcgtttacaaactttaaagtt
ggaagcactattgtacaggcggcatttacacaccttatacaatattatcaccggtttcaa
aaactattcacacaacatccattcaaaacaatgcctgctaagtctgatttggtgaacatg
catcttataatggttgagatgaagaagtataaacccaacttttaa
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