Ciona intestinalis (yellow sea squirt): 100176475
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Entry
100176475 CDS
T01056
Name
(RefSeq) 39S ribosomal protein L44, mitochondrial
KO
K20301
trafficking protein particle complex subunit 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176475
Membrane trafficking [BR:
cin04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100176475
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
TRAPP complex I
100176475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RM44_endonuclase
Ribonucleas_3_3
dsrm
Motif
Other DBs
NCBI-GeneID:
100176475
NCBI-ProteinID:
XP_002131410
Ensembl:
ENSCING00000000202
ENSCING00000015058
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All DBs
Position
2:complement(490111..493393)
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AA seq
340 aa
AA seq
DB search
MWGICLSAILKRGNVGSLIKQRVHPRNYSPVPGNPAIKPVNPSAVMPPRWMKHYYLALER
KEEIEGPDPPLPRSSKPNWNITAELTAFKNRLDIEVPNELLVSALTEPLFNEPSTEDTGY
SKLLKDGSKFVEEFVSHYVKEAFPFLTSEGRSSICDFLLLDSNIAYLALNLGYNDLLQLT
GLRSSEKVLAESLVASIEAINLSEGPVAAAKFILNFLVPQLVGKDIIDDIWKPSNPMALL
TESFKISGKPAPQARLIQQCGVNTVTPIYYVGLFSGKDLIAKSGAESIVLAETDAAKLAL
KHIYHVHTLSKSPPMGNLLNQDFLNKLFYPLIDNKTALSS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcatatgtttatctgccattttaaaaagaggaaatgttggtagtttaataaaa
cagagagtacacccccgaaattattcacctgtgcctggaaatccagccattaaacccgtc
aatccatctgctgtaatgccaccacggtggatgaagcattactaccttgccttggaaaga
aaagaggaaatagaaggaccagatccaccattaccaagatcttctaaaccaaactggaat
attacagcagagctaacagcatttaaaaatcgacttgacattgaagttccaaatgaacta
ctcgtttcagctttaacagagcctttgtttaatgaaccttcaacagaagatactggttac
agcaaattactaaaagatggttcaaagtttgtggaagaatttgtttcacattatgtcaaa
gaggcgtttccattcctaacaagtgaaggtcgaagttcaatatgtgatttcttgttacta
gattccaacattgcatatttagcattaaacctgggttacaatgatttactacagctaact
ggattgaggtcgtcagaaaaggttcttgctgaatcgcttgtggcaagcatagaagcaata
aatctcagtgaagggcctgttgctgctgctaaattcatattaaactttttggttccacag
ttggtgggaaaagatatcatagatgacatctggaaaccttccaatccaatggctttgttg
accgaaagtttcaaaataagtggcaaaccagctccacaggcaagattaattcaacaatgt
ggagtaaacactgtaacaccaatatattacgttggactgttttctggtaaagatttaatt
gcaaagtctggagcggagagcattgtacttgctgagactgatgctgctaaacttgcatta
aaacatatttaccatgtccatacattatctaaatcgccaccaatgggaaacctacttaac
caagatttcttaaacaaactattctatcctttaattgataacaaaactgcattgagttca
tga
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