Ciona intestinalis (yellow sea squirt): 100176506
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Entry
100176506 CDS
T01056
Name
(RefSeq) vesicle-trafficking protein SEC22b
KO
K08517
vesicle transport protein SEC22
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04130
SNARE interactions in vesicular transport
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100176506
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100176506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176506
Membrane trafficking [BR:
cin04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
100176506
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GFIT
Motif
Pfam:
Longin
Synaptobrevin
DUF3755
Motif
Other DBs
NCBI-GeneID:
100176506
NCBI-ProteinID:
XP_002129330
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All DBs
Position
13:1060199..1063434
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AA seq
215 aa
AA seq
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MVLMTMIARVGDGLALAASMQEDEQTGKSLTEYQNQAKMLFRKLNNQSPDRCTIESGRML
FHYMIDQSICYLVLCEPSFSKKLAFSYLEELSSEFFVQYGNRVNSVTRPYAFIEFDTYIQ
KTKKAYMDSRTRRNLSVVSSELQEVQKIMVSNIDDVLQRGVALSDLGDKASNLATMSKKY
KQDAHYLNLRSSYAKIAAVVILLLIFIIYIRYWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggttttaatgacaatgatagccagagtaggggatgggctagccctggcagcctccatg
caggaagatgaacagaccggcaagagcctcactgaataccaaaaccaagcaaaaatgctg
ttccgtaagttgaacaaccaaagtcctgacagatgtacaattgaatctggaaggatgtta
tttcactacatgattgaccagagcatttgttaccttgtgctttgtgaaccaagttttagt
aaaaaacttgccttttcttacttagaagaattatcatccgaattctttgtacaatatggg
aacagagttaactcagtaacaaggccatatgcatttattgagtttgacacatatatacag
aagactaaaaaggcgtatatggatagcaggacacgcaggaatttaagtgttgtctcatca
gaactacaagaagttcaaaagattatggtttcgaatattgatgatgttttgcaaagagga
gttgctttgtcagatctaggagacaaggcaagcaacttagctacaatgtcaaagaaatat
aagcaagatgctcactaccttaacctgaggtcttcatatgctaagattgcagccgttgtc
atcttactacttattttcattatatatatacgatactggtggctatga
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