Ciona intestinalis (yellow sea squirt): 100176524
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Entry
100176524 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase arih1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100176524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100176524
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100176524
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100176524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
UBA_ARI1
IBR_2
Ariadne
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100176524
NCBI-ProteinID:
XP_002129552
Ensembl:
ENSCING00000000894
LinkDB
All DBs
Position
2:629039..634223
Genome browser
AA seq
520 aa
AA seq
DB search
MDSDEDFDYYDAGDDEEDDLSLRDDADDDDEDEGYLDDNIIVSEAPHGSETKDEEVYPHE
CLSADRIVDLMVEILKEVNDIVNIPPTTLRILLAHFNWDKELLLEKYYEYDGNQERIFKE
AHVVSPFKMKRSNKSRAHSSQSHSLDVSCEICCSSCSSSFMTGLDCGHMFCKGCWSQYLR
TKIMDEGMSQTIPCPAFDCEIIVDDAIVMSLISDKKVRLKYQHLMTNSFVECNSLLKWCP
SPDCHHVIKVEYRDRRAVKCDCGREFCFECSESWHDPVLCVHLKKWLKKCDDDSETSNWI
SANTKECPKCQVTIEKDGGCNHVICRSQTCKHEFCWVCLGPWDPHGASWYNCNRYNADDA
KKARDTQQRSREMLQRYLFYCNRYMNHLQSLKFEHKLYARVKRKMEEMQQLNMSWIEVQF
LKKAVDVLCQCRQTLMYTYVFAFFLKRNNQLLLFEDNQADLEKATETLSEYLERDITTAS
IRDIKQKVQDKYRYCDSRRSVLLRHVHEGYDKEWWDYLDI
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatgaggattttgattattatgatgctggtgatgatgaagaggatgatttg
tcgcttcgtgatgatgcagatgacgatgatgaggatgagggatatctggatgataatatt
attgtgtccgaagcaccacatggaagtgagaccaaagatgaagaagtttatccccacgaa
tgtttgtctgcagatcgaattgtagatctaatggttgaaatattaaaagaagtcaatgat
attgttaatatcccacctactactttacggatacttcttgcacattttaattgggataag
gaactacttcttgaaaagtattatgagtacgatggtaatcaggagagaatttttaaagaa
gctcatgttgtcagtccatttaaaatgaaacgttcaaacaagtctagggctcattccagt
caaagtcattctttggatgtttcatgtgaaatatgttgcagctcatgctcatcttccttc
atgactggactagactgtggacatatgttctgtaaaggatgttggtctcaatatttacga
acaaagataatggatgaagggatgtcgcagacaatcccttgcccagctttcgactgtgaa
attattgttgatgatgccattgtaatgagtttaatatccgacaaaaaagttcgattaaag
tatcaacatttgatgacaaatagttttgtggagtgcaactctttattaaaatggtgtcct
tctcctgactgccaccatgtgattaaagttgagtatcgcgacagacgggctgttaaatgt
gattgtggtcgggagttctgctttgagtgtagtgaatcttggcacgatccagtgttatgt
gtgcatttaaagaagtggttgaagaaatgtgatgatgatagtgagacgtcaaactggata
tctgcaaatacgaaggagtgtcccaagtgtcaggtgacgattgagaaggatggcggatgc
aaccacgttatatgtcgtagtcaaacatgcaagcatgaattttgttgggtatgtttgggg
ccatgggatccacatggagcgtcgtggtataattgtaaccgatacaatgctgatgatgca
aaaaaagcgagagacactcagcagagatctcgtgaaatgcttcaaagatatttattttat
tgcaatcggtacatgaaccacctgcaaagtttgaagtttgagcacaagttgtatgcaaga
gttaaaagaaagatggaggaaatgcagcaactaaacatgtcctggattgaagttcagttt
ttaaagaaagctgttgacgttttgtgtcagtgtcgtcaaacccttatgtatacttacgtg
tttgccttcttcttaaaacggaacaaccaacttctcttatttgaggataaccaagcagat
ttggaaaaagcaactgaaacgttaagtgaatatttagaacgggatattacaactgcgtct
attagagatatcaaacaaaaagtgcaagacaaatacagatactgtgattctcgacgaagt
gttttattacgtcacgttcatgaaggatatgataaggagtggtgggattatctggatata
tga
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