Ciona intestinalis (yellow sea squirt): 100176589
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Entry
100176589 CDS
T01056
Name
(RefSeq) DNA replication licensing factor MCM4
KO
K02212
DNA replication licensing factor MCM4 [EC:
5.6.2.3
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100176589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cin03032
]
100176589
Enzymes [BR:
cin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100176589
DNA replication proteins [BR:
cin03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
100176589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
MCM_N
AAA_5
Mg_chelatase
AAA_3
MCM4_WHD
AAA_16
AAA
RuvB_N
Zn_ribbon_Elf1
HypA
Zn_ribbon_8
AAA_7
AAA_22
Motif
Other DBs
NCBI-GeneID:
100176589
NCBI-ProteinID:
XP_002123450
Ensembl:
ENSCING00000007268
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MSSPDRRRRGRQTPDAAPSSDLDMLPPTSPARPVDLLDATSDSILAPQTPANISEIDLSS
PLFYGTPSSARTPGGTALTPGRTPRGTMTPVRQRADLGSNNRVRVVNLQSDQNPEQSRHE
TIPEETEEELASSADPAGHLVIWGTDVVVSRCRTRFTQFINSFLPSEEDDAMETDGGDAN
EPMYLRKLEDISVTEEPYFEVDCSHLKTFDADLYRQLICYPQEVIPTFDMAVNEMFFGRY
PDISLEHQIQVKPFNAERTKNMRNLNPEDIDQLITIYGMVIQSSSLIPEMREGFFRCNVC
NHEVTVEIERGRIAEPSICDRCKTTHSMSLIHNRSLFTDRQLVKLQEAPDDMPAGQTPHS
VSLHSYGDLVDSVQPGDRVIVTGVYRAQPLRANPRMRNVKSVYRTHVDVLHFRKKDEKRQ
KLYETADDEDSQIQFSKERVEMIRSLSKKPDIYDRLARAVAPSVFGHDDIKKGILLQLFG
GCRKQLKNYAKTGSKTGMRSEMHVLLCGDPGTSKSQLLRYVHDKLSPRGQYTSGKGSSAV
GLTAYITKEQESKQLMMQPGALVLSDNGICCIDEFDKMNDSTRSILHEVMEQQTLSIAKA
GIICQLNARTSVMAAANPCESQWNHKKTIIENIMLPHTLLSRFDLIFLMLDPQDEAYDRR
LANHLVSLYHRTQEEEEMDVMDSEVLKDYVAYARAFVKPRLTEDAGQELVQAYVEMRKGG
GSGNKGGVTAYPRQLESLIRLSEAHARSRLSLKVERVDVQEALRLYREALKQSATDPRTG
IVDISILTTGMSATARKRQEELKGALKQLIDQDKGRGGQGGKAGPTLRCRPLLDRWRSQT
DQIITQAMFDEAVRALQDDEVLVRTGDVIRLC
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacctgatcgtagacgacgtggaagacagacacctgatgctgctcccagcagt
gatcttgacatgctgcctccaacatcacctgcacgtcccgttgatctactcgacgcaaca
tcagattcgatccttgcgccacaaacacccgctaacataagtgaaatagatctgagttct
ccactattttacggaactcctagcagtgccaggacacctggtgggacagcgcttacacct
ggtagaactccaagaggaacaatgacgccggttcggcaacgtgcagacttgggaagtaac
aacagagtccgggttgttaatcttcaatcagatcaaaatcctgagcaatctcgtcatgaa
acgattccggaagaaacagaagaggagcttgcgtcttctgctgatccggccggacatctt
gtgatctggggaactgatgttgtggtcagtcggtgtagaactcgtttcacacagtttata
aacagtttcctaccatctgaagaagacgatgcaatggaaactgatggtggcgatgcaaat
gaaccaatgtatctgaggaagcttgaggatatcagtgttactgaggaaccttactttgaa
gtggattgctcgcacttgaaaacgtttgatgccgatttgtaccggcaacttatttgttat
ccacaggaagtcatcccaacatttgatatggcagtaaatgaaatgttctttggtcgatat
ccggatatttcactcgagcatcagatacaggtcaagccatttaacgctgaacgcacaaag
aacatgaggaatttaaatcctgaagatattgatcaactgatcaccatatatggtatggtg
atccaatcttcttctttgatccctgagatgagggaaggattcttccgatgcaatgtttgt
aatcatgaagtaacggtggaaattgaacgtggcagaattgctgagccttcgatttgtgat
cgatgcaaaacaacacattcaatgtctctcattcataatcgatcattattcacagacaga
caattggtaaaactacaggaagcgccagatgacatgccagcaggtcaaacaccgcactca
gtgtctttacattcatatggagatctggttgactcggtccaacccggagacagggtgatt
gtaactggtgtttatcgtgcccaacccctgcgagctaatccacgaatgaggaacgtcaaa
tctgtctacagaactcatgttgatgttctgcactttcgtaaaaaagatgagaaaagacag
aaactttacgaaactgcagatgatgaagatagccaaattcagttcagcaaggaaagagtt
gaaatgattcgatcgctttcaaagaaaccagacatctatgatcgtcttgcacgagctgtt
gcaccaagtgtgtttggacacgatgatatcaagaaaggaattcttttgcagttgtttggt
ggttgccgcaagcagttgaagaattatgcgaaaactggaagcaagactggtatgagatct
gagatgcatgtgttgttgtgtggagacccaggaaccagcaagtcacaactgttgagatac
gtgcatgataagttgtcacctcgtggtcaatatacaagtggaaagggttcaagtgctgtt
ggtttgacagcttatattacgaaagaacaagaatccaaacagttaatgatgcaaccgggc
gcgcttgtgctttcagataatggtatttgctgcatagatgagtttgataagatgaatgat
agtacaagatcgattctacatgaagtcatggaacaacaaactctctccattgcaaaagcc
ggaattatttgtcagttgaatgctcggacatcagtgatggccgctgccaatccttgcgag
tcgcagtggaaccacaaaaagacgatcatagaaaacatcatgcttcctcatacacttctc
tcaagatttgatctcatttttctcatgttggatcctcaagatgaagcatatgatcgtcga
ctagccaaccacttggtgtcactctaccaccgtacacaggaagaagaagaaatggacgtc
atggattccgaggttttgaaagattacgtggcttatgctcgggcttttgttaaacctcgc
ctcacagaagatgcagggcaggaacttgttcaggcatatgttgagatgcggaagggtggt
ggtagtggcaacaaaggaggtgtaactgcctaccctcgccagttggaatcacttatacga
ctctcagaagcacacgccagaagtcgactctcactcaaagtagaaagagttgatgttcaa
gaagctttaagattgtacagagaagctctcaagcaatctgctactgatcctcgtactggc
attgttgatatttcaattcttacaacaggaatgagtgccactgctagaaaacgccaagag
gaattgaaaggagctctaaagcaattgattgaccaagacaaaggtcgtggtggacagggt
ggtaaagctggtcccacccttcgctgtcgaccgttgcttgatagatggagaagccagaca
gaccagatcatcacacaagcgatgttcgatgaagctgttcgtgctttacaagatgatgaa
gtgcttgttcgtacaggggatgtcattcgtttgtgttaa
DBGET
integrated database retrieval system
