Ciona intestinalis (yellow sea squirt): 100176656
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Entry
100176656 CDS
T01056
Name
(RefSeq) lamin-L(II)-like isoform X1
KO
K07611
lamin B
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100176656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100176656
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
100176656
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Snapin_Pallidin
DivIC
REV
CP12
FlaC_arch
Sec10_N
TraF_2
Motif
Other DBs
NCBI-GeneID:
100176656
NCBI-ProteinID:
XP_002119169
Ensembl:
ENSCING00000000897
UniProt:
F6U1H7
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Position
12:589437..600964
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AA seq
465 aa
AA seq
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MATPKQQTRSRDKECPSTPLSPSISSRKDERDQLANLNNRMAAYVEKVRSLETENSRLQI
KVTSYEETSTREVTSLKAMYEREISEARRLLDELSKEKAQLQIESNSFREKWEIELNKAS
ALGHDNAVLEGKLKDSNSLLFSRENQLQCAKREREEAVEEAETLRSKLNDIQVELEASQK
ALDTETLMRVNFENKLQSLKEELEFKEKLYQEEVSEIRKRHTLSVTEIDEKVKGVYESQF
EVALIELRDQQNADLEQMKEDLEGQYSSKIEELKKKLDYVRKSTMKGSEDCKAAEMKVER
LQTTIKSLQNKNNNLNNRVQDLEGQVATEREIRFSAVLSIEQQRDEALQKITTMEKEYLE
LMDLKIKLDHEIGVYRKLLEEEETRLNLSPSPHVDGSDSKRRSRRKRKRVTTQSELAQKA
KKQEIASATYSSETVITQKSVNVGEDVLHQQDDPAPEGNNSCSIM
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccaaaacagcaaaccagaagcagagacaaggaatgtccctccacccctctc
agtccttcaatttcttcacgcaaagatgaacgggaccagttggcaaaccttaacaacagg
atggcagcttatgtggaaaaagttcgttctcttgaaacagaaaactcgagacttcaaatc
aaagttacgagttacgaggagacgagcactcgtgaggtgactagcttaaaagcgatgtat
gaacgtgaaatatcagaagctcggagacttcttgatgaattgtcaaaagaaaaagctcaa
ctccaaattgaatccaattcatttagggagaaatgggaaattgaattaaacaaagccagt
gccctgggccatgataacgctgtgttggaaggaaagctgaaagattcaaactctcttctg
ttttcgagggaaaaccagttacagtgcgccaagcgcgagagggaggaagctgttgaagaa
gctgaaaccttgcgatcgaaactaaacgacatccaggttgaattggaagcttcacagaaa
gcattggacacagaaacattaatgagagttaactttgaaaataaacttcaatctttgaag
gaagaattggagtttaaagaaaagttgtatcaagaagaagtgtctgagatacgaaagcgt
cacacgcttagtgttacggagattgatgaaaaagtgaaaggggtttatgagagtcagttc
gaagtggccctcattgaactgagagatcaacaaaacgccgatcttgagcaaatgaaagaa
gatttggaaggacaatattcgtcgaagatcgaagaacttaaaaagaagcttgactacgtt
cgtaagagcaccatgaagggttcggaggattgtaaagctgccgagatgaaagttgagagg
ttgcaaaccacaattaaatcattgcagaacaaaaacaacaatctaaacaaccgtgttcaa
gacttagagggacaagtagcaaccgagcgcgagattcgattctcggccgtgttatcgatt
gaacagcaacgtgatgaagcgttgcagaagatcacgacgatggaaaaggaatatttggaa
ctcatggatctcaagattaaactcgaccacgagattggggtttataggaagctgttggag
gaagaagagacgaggttaaacttgagtccgagccctcatgtggacggctctgattcaaaa
cgacgatcaagacgtaaaaggaaaagggtcaccactcaaagtgaattggcacaaaaagca
aagaaacaggagattgcgagcgccacttattcaagtgagacagtcatcactcagaagtcg
gtgaatgttggggaagatgtgttgcatcaacaggatgaccccgcccccgagggtaacaac
tcatgttcaatcatgtaa
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