Ciona intestinalis (yellow sea squirt): 100176657
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Entry
100176657 CDS
T01056
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03272
Virion - Hepatitis viruses
cin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100176657
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100176657
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100176657
04147 Exosome [BR:
cin04147
]
100176657
04515 Cell adhesion molecules [BR:
cin04515
]
100176657
Cilium and associated proteins [BR:
cin03037
]
Other cilia and associated proteins
Stereociliary proteins
100176657
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
100176657
Exosomal proteins of colorectal cancer cells
100176657
Cell adhesion molecules [BR:
cin04515
]
Immunoglobulin superfamily
L1 family
100176657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
Clc-like
DUF4064
L_HMGIC_fpl
Claudin_3
UPF0220
AA_permease_2
SK_channel
Motif
Other DBs
NCBI-GeneID:
100176657
NCBI-ProteinID:
XP_002120514
Ensembl:
ENSCING00000006335
UniProt:
F6PX91
LinkDB
All DBs
Position
8:3150536..3155351
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AA seq
232 aa
AA seq
DB search
MANSSLQAVGLVLSVIAAVCTTLAVILPEWRKNDPKGEVIEAVVRHQGIWLRCTSYSTGI
WQCDDFDAFFLGLPAQLQVARGLALCSVVFGFFGIMLSIFGMECTRCIENNPKTKTRIAL
IASGFFIASALSIGIAVSYYASQVAQEYTASSILLVNDLGQRYVFGSSLFLGWAAMAIGV
LGGAVMMCGSFYVDKEEDEYWNKGRVGRGVRRMRSSFRQSFRPRVTKDADYV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagctctttacaagcagtcggccttgtacttagcgtcatagctgccgtgtgt
acaaccctggcagttattctaccagaatggagaaagaatgatcctaaaggtgaagtcata
gaggcggttgttcgtcatcaaggtatttggttgaggtgtacttcttactcgactggtatt
tggcaatgcgatgactttgatgctttctttctcggtctccctgctcagttgcaggtagcc
agaggtttggcgctttgttccgtagtgttcggtttcttcgggattatgttgtcaatcttc
ggtatggagtgcacaaggtgtattgagaataacccgaagacaaagactagaatcgctctc
atcgcgtctggcttctttatcgcttctgcattgagtattgggatcgccgtgtcttactat
gcgagccaggtcgcgcaagagtacacggcctccagcattctacttgtcaatgaccttgga
caaagatacgtgttcggttcatctctcttcctaggatgggctgccatggcgattggagtc
cttggaggagcagtgatgatgtgtggaagcttctacgttgataaggaggaggatgaatat
tggaacaaaggaagagtaggacgaggagtcaggagaatgaggagcagcttccgtcagagc
ttcagaccaagagttacaaaggatgcagattacgtctaa
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