KEGG   Ciona intestinalis (yellow sea squirt): 100176657
Entry
100176657         CDS       T01056                                 
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03272  Virion - Hepatitis viruses
cin04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    100176657
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    100176657
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cin03037]
    100176657
   04147 Exosome [BR:cin04147]
    100176657
   04515 Cell adhesion molecules [BR:cin04515]
    100176657
Cilium and associated proteins [BR:cin03037]
 Other cilia and associated proteins
  Stereociliary proteins
   100176657
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   100176657
  Exosomal proteins of colorectal cancer cells
   100176657
Cell adhesion molecules [BR:cin04515]
 Immunoglobulin superfamily
  L1 family
   100176657
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM37 Clc-like DUF4064 L_HMGIC_fpl Claudin_3 UPF0220 AA_permease_2 SK_channel
Other DBs
NCBI-GeneID: 100176657
NCBI-ProteinID: XP_002120514
Ensembl: ENSCING00000006335
UniProt: F6PX91
LinkDB
Position
8:3150536..3155351
AA seq 232 aa
MANSSLQAVGLVLSVIAAVCTTLAVILPEWRKNDPKGEVIEAVVRHQGIWLRCTSYSTGI
WQCDDFDAFFLGLPAQLQVARGLALCSVVFGFFGIMLSIFGMECTRCIENNPKTKTRIAL
IASGFFIASALSIGIAVSYYASQVAQEYTASSILLVNDLGQRYVFGSSLFLGWAAMAIGV
LGGAVMMCGSFYVDKEEDEYWNKGRVGRGVRRMRSSFRQSFRPRVTKDADYV
NT seq 699 nt   +upstreamnt  +downstreamnt
atggcaaacagctctttacaagcagtcggccttgtacttagcgtcatagctgccgtgtgt
acaaccctggcagttattctaccagaatggagaaagaatgatcctaaaggtgaagtcata
gaggcggttgttcgtcatcaaggtatttggttgaggtgtacttcttactcgactggtatt
tggcaatgcgatgactttgatgctttctttctcggtctccctgctcagttgcaggtagcc
agaggtttggcgctttgttccgtagtgttcggtttcttcgggattatgttgtcaatcttc
ggtatggagtgcacaaggtgtattgagaataacccgaagacaaagactagaatcgctctc
atcgcgtctggcttctttatcgcttctgcattgagtattgggatcgccgtgtcttactat
gcgagccaggtcgcgcaagagtacacggcctccagcattctacttgtcaatgaccttgga
caaagatacgtgttcggttcatctctcttcctaggatgggctgccatggcgattggagtc
cttggaggagcagtgatgatgtgtggaagcttctacgttgataaggaggaggatgaatat
tggaacaaaggaagagtaggacgaggagtcaggagaatgaggagcagcttccgtcagagc
ttcagaccaagagttacaaaggatgcagattacgtctaa

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