Ciona intestinalis (yellow sea squirt): 100176663
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Entry
100176663 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100176663 isoform X2
KO
K24947
tetratricopeptide repeat protein 34
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100176663
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
100176663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_9
TPR_19
TPR_14
TPR_16
TPR_8
TPR_6
TPR_1
TPR_Slam
TPR_11
ANAPC3
TPR_12
TPR_15
Coatomer_E
ARM_TT21_5th
ARM_TT21_2nd
MHB
BTAD
T7SS_EccA1_N
TPR_5
TPR-S
Motif
Other DBs
NCBI-GeneID:
100176663
NCBI-ProteinID:
XP_002125800
LinkDB
All DBs
Position
1:complement(5795549..5804589)
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AA seq
1244 aa
AA seq
DB search
MTDSNQAESFCVDGDIKYTAGNVAAATASYLQGHILDSSSVKEHVTTFTEEQRSESVEIL
QNWLKPKEQSTTDKSKLGVQATPDQIWEFIFCLEPEAVTTCFARIEPLLREKRYQQVIDS
CTAILKQYPQDTPPILLQRALARTLLGGREKEAISDYLRAYLKDKDITMQVVRNKQGDHL
DSIKELMQNCVFSKPTSAAETKAHKQWLALTVDCCRFLLTFDPNDFRLQMTFTERLKAMH
KIDRALAMLTETIEVLHLDLKPDPAKLTEALLRRSECQIVKQQVDQAISDITAGLNAASD
IALSQKGPDSSTSSNEIDVIYSEKEKTLSIAKDIFGSKTNDILELYMLLDKSASKLSAED
RFKTVTKMDNIRNSADLYRAMLVLQPSSKDAQFKLASCYAKLGKNKLAVKIYDKLLEDTH
FSQDTAILTARALCYRELGNKAEAQKDYDALLRNNPRDVCLLCERAMMYMEDGNNIALVQ
DLMAACKINQKLVVTQMSKEPLVQRTRTRQILFDHAKSLLQDAPLPQDKAPRTDDISLEE
VIIKQKDSSLAVALSLSQLLTKLNPADQSAHILMAHAMFHAGCTNDAETKLKKMLQDHPQ
ALDLHVIKLHLGLMKIFTKRIDEGMSALIEVLSTKGERVVSSLLRDIPISERASLSDESH
HYGIDSLHKERDPATVRRAVECFTLAILCCRGTDLVLEGLNGGTGVYRSYIARAECMAHL
GDQRAAVLDFSAAIEVNPLCVEGLCGRAFMRLALGEEYDCVNDVTSACELDIYAVTDHIL
GLPDEAKKLLLFWIDHRVVVLLLNYGYKSGSTDRLNTGGSASTVSMLDETLNKPGEDVSR
TSSLSSIHLPSPLPNDGSQSLAPPTDRNVDDITPTNIASNSADNQQDTDDSLEVSDPLNP
NKKRLHKSAASKRDLKEALIALENTYVHDQEGENNPVMSRHTSRGSTATTATSVSTYDDI
ISGMEKAEILQKSMGLGKLLITVDNSNPTWHGMYADILIVKGEFDEALRHLQLVMDLSPN
DVTAVARAGLINVKMNRFQMASALLSSLADVDKNGLLYVLKAIDSSRRRKLAEETIKQAE
ALISVDKYAEARSYYSLSLLTDPSSKIDKLRRRSRCLLKMGENSKAIADISEVIKETATR
PQVNDYCVRGNLHLVTGKEFLACKDFMQAIELERHQAISLIHVKPGRTVLCSIFYQQAVE
AFSKHDYQGCHDICEMGLVIDGDDIEMRKLRARAKREISKCIVQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgacagattctaatcaagcagagtctttttgtgtggacggagacattaagtacacagct
ggaaacgttgcagcggcaacagcttcgtacttacaagggcatattttggatagcagttcc
gtgaaagaacatgtaactacgttcacagaggaacaacgttcagaaagtgtagaaattttg
cagaattggttaaagcccaaagaacaatctactaccgacaaatcaaaacttggcgttcag
gcaacacctgaccaaatatgggagttcatattctgcctcgagccggaagctgtaaccact
tgcttcgctagaattgagccgttattgcgagagaagcggtaccaacaggtgatcgacagc
tgcaccgccattttaaagcagtacccacaagacacgccaccaatacttttgcaaagagcg
cttgcccgtacgttgcttgggggaagggaaaaggaagcgatttctgattacctgcgagct
tacttgaaggacaaagacattaccatgcaggtggttagaaacaagcagggtgaccacctg
gacagcataaaggaactaatgcaaaactgtgtattttccaagccaacatcagccgcagaa
acgaaagcacataaacaatggctcgcgctcactgtagattgttgtcgatttttactcacg
tttgatccaaacgattttcggctgcaaatgacattcacggaacggctgaaagcaatgcac
aaaatcgaccgtgctttagcaatgctgacggaaacgattgaagtgctgcacttagacctg
aaaccggatccggcgaaactcacagaagccttacttcgacgcagtgaatgccaaatcgtg
aaacagcaagttgaccaagccataagcgacataactgctggcctaaatgctgcatctgat
atagccctctcccaaaaagggccagacagttctacatctagtaatgaaattgatgtaata
tattccgaaaaggaaaaaacgttatctattgccaaagacatttttggtagcaaaactaac
gatatattagaactgtatatgcttttggacaaaagtgcatcaaaactttctgcggaggac
agatttaaaactgtaacaaaaatggacaacattcgaaattcggcagatttgtaccgagct
atgttggtactacagcccagcagcaaagacgctcagttcaaactggcatcgtgctatgct
aagttgggaaaaaataaactggctgtaaagatatatgacaagctactagaggacactcac
ttctcacaggacactgcaattctaacagccagggcactctgctaccgcgaactaggaaac
aaagcagaggcgcagaaagattacgacgcattgttacgcaacaatccccgtgacgtatgt
ctactgtgtgaacgtgcgatgatgtacatggaagacggcaataatattgcccttgtacaa
gatttaatggctgcttgcaagattaaccagaagcttgttgttacgcaaatgagcaaggag
cctttggtacagagaacacgaacccgacagattctatttgaccatgccaaaagtttatta
caggatgcacctttaccacaagataaagctccgcggacggatgacatttcgcttgaggaa
gtgataattaaacaaaaggacagctcactcgctgtagcactaagtttatctcaactgcta
acaaagctaaatccagctgatcagtctgcccacatccttatggcgcacgccatgtttcat
gcaggctgtaccaacgatgcggaaacaaagctgaagaaaatgctccaagatcacccacaa
gcattggacctccatgttataaagttacatcttggactcatgaagatttttactaaacga
atcgatgaaggaatgtctgcacttatcgaggtcttgtcaacaaaaggcgaacgcgtcgta
tcttccctgctgagagacatcccgatcagtgagcgtgcaagtctctctgatgagtcacat
cattatggaatagatagtttgcacaaagaaagggatcctgcgactgtacggcgggcggtc
gaatgctttacgctcgcaatactttgctgtcgtgggacggatcttgtgcttgaagggtta
aatggcggaactggagtttatcgttcttacattgcaagagcggagtgcatggctcattta
ggtgaccaaagagcagccgttcttgacttttccgcagctattgaggtgaatccactatgc
gtcgaaggactatgtgggagagcatttatgagattggctcttggtgaggagtacgattgc
gttaatgatgtcacttctgcctgcgaacttgacatatacgccgttactgatcacattcta
ggtttaccggacgaggcaaagaaacttctgttgttctggatagatcacagagtagttgtt
ttgctgctgaattatggatacaaatctggttctacagacagactcaacaccgggggctct
gcttcgacagtaagcatgcttgatgaaactttgaataaaccgggtgaagatgtttcacga
acttcgtctctctcatcaatacatttaccttcccctcttccgaacgacggtagtcaatca
ctggctcctcctaccgacagaaacgttgatgacattacacctacaaatattgcgtcgaat
agcgcagataaccagcaagatacggatgattccctagaagtcagcgatccactaaatccc
aataagaaaagactacacaaatcagctgcaagtaaaagagatttaaaagaggcgttgata
gcattagaaaacacatatgtccacgatcaggaaggagaaaacaatcctgtaatgtcacgt
cacactagccgtgggtccaccgccaccacagcgacttcggtgtcaacatacgatgatatc
attagtggcatggaaaaggctgagatccttcaaaagtcaatgggactaggaaaacttctt
ataaccgttgacaattcaaacccgacatggcacggaatgtatgccgatattttgatagtt
aaaggcgaatttgacgaagcattacgtcatctgcaactcgttatggacttgtcaccaaat
gacgtcacagcagtggcgcgtgctggcctgatcaacgttaaaatgaaccggtttcagatg
gcatcagcgttattaagctccttggcagatgtcgataaaaatggtttactctatgttttg
aaagccattgactcaagtcgccgacgtaaattggcggaggaaacgataaaacaggcagaa
gctttgatatctgttgacaagtacgcagaggctcgtagttactacagcttgagtctttta
actgatccatcgtccaagatagacaagttgcggaggcgttctaggtgtcttttaaaaatg
ggagaaaatagcaaggccattgcggatatttctgaagttataaaagagaccgctaccaga
cctcaagttaacgattactgcgtaaggggtaacctacatcttgtaactggaaaggaattt
cttgcgtgtaaagatttcatgcaagcaatagaattagaaagacaccaagccatatccctt
atccatgtaaagcctggacgaacggtgctgtgctcgatattttaccagcaagcggtggag
gcgttcagtaaacatgattaccaggggtgtcacgacatttgcgagatgggtttagtaatt
gacggcgacgacatcgaaatgagaaagcttagagctcgagctaaacgcgaaatcagcaaa
tgcattgtacaatga
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