Ciona intestinalis (yellow sea squirt): 100176688
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Entry
100176688 CDS
T01056
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100176688
Membrane trafficking [BR:
cin04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100176688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
CRAL_TRIO_2
PH
Spectrin_5
Cor1
PH_6
Motif
Other DBs
NCBI-GeneID:
100176688
NCBI-ProteinID:
XP_018672660
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MNLSWKRELLNKQLASIETKGKGQSLILRRAYSENEPDISSNKIDVLRRVNSTGCCSMER
NRGHVGSTWSETLSDDVSEDSDTSSRNGEITRDVTDSAISLDDVELGFSLQCSQTKTLSK
ISTISRNITVPDNMPSLENAEWRLRSFSDVASTELGFFERNFVSWETIDDVDKESGNSKR
HESYNPSESSVIFPDEMRSYYDFITACSDVRKHGKLGSNARKDSATFSNSDGYPCTLTAA
NLRHQLQRCYVYIHGGKDESGCPVICFPHYPSLHEIPDEDFKNTLLYLTQTTRASVADLG
FVIVLDRRRDKWSSLRGTLIRLAEHFPGNIRFVFVLRPQGFFQGAISNIGFRWQKDDFSM
KVPVEMLTHLDELHQRIHPSDLTKDFQGTFGYDHSMWINNRMLVETFATKATTIITSLED
YGSVLAESELPNDSKSAAVLINFQQIKTNTHKEEILSLEREAKSLRDKISNLNINDVNAV
ESDLMECYATLISETNLTFENFWLKYKEKMKQCLELRLFEEDYREVCSKLESIQKQIEMK
YSSVGITALWMESLISDLTGLEQQSKECLTLCENVQRSGSDLVTVGHYAVDCIQPKTDEL
SNLSSIINEEVSRLQDSVKSYQTFLTQINEVRQWCEDGMSFLAGQVLEKSLTLDGATSAF
DELETRFKNKEKIIGIMNSDASKLCGRVWSSEAEGLSSHVKSRLDEVIQLYKKRRASLKK
VTTKHGDRPIQLVEPSKKTTDSPKTSKREVNRENKQNGRGTKRNSRLVITKLEDNQVSSS
PPSTRKTQHPKVEKQSENLFLKQQHVMKELVSTERTYITELKSIVEGYGQPIDDLERSDV
PVVLQGKSKVLLGNMGDIYDFHGNVFLALLDECMDCPSSVGKCFLDKKENFEIYSEYCQN
SIKSEHLRNLVGEQHPFFVQCQKNLGHRLSLSAFLLKPVQRVTKYQLLLQQMLKYSSTHL
KELQAAVQAMLEVLKSVNDGMHQVMITGYKGDLTLLGKLHLQGQFTMQVDHKKSRVKSLK
RPRFSKLIQRHLFLYDDEVLICKAQTAENLDDEHSKTTNPNISPVAKVKGLQYLYKNSIK
MGSAGMSDTIKSDARKFEIWSEGREHVYTLQAPTLTTKQEWVRDLKKVLSSQTKVPFTSA
IDITNTQHGIMKRKSSCPPTTVAYVKPKQSENESKNSNKVQVKPKRAASLCVADIKVECS
ASDFKQLSLDH
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtcctggaagagagaattactgaacaaacaacttgcgtcaatcgagacgaaa
ggcaaaggacaaagtttaattttaagaagggcttattctgagaacgaaccagacatttcg
tcaaacaaaatcgatgttttgagaagagttaattccactggctgttgctcaatggagcgt
aaccgtggtcacgtgggtagtacttggtcagaaacattaagcgatgacgtcagtgaggac
agtgatacaagttcacgaaatggggaaatcacccgtgacgtcaccgattcagcaatttct
cttgatgacgtagagctcggattttcgttgcagtgttctcagacgaagacgttatcaaaa
atatcaacaatttctcggaatatcactgttcctgataatatgccgtcactggaaaacgcg
gaatggcgtcttcggtcgttcagtgacgtcgcgtctacagagttgggatttttcgagcgg
aatttcgtatcctgggaaacgattgatgacgtggacaaagaaagtgggaattccaaaaga
cacgagtcatataatcccagcgagagttcggtcatatttcctgatgaaatgagaagctat
tatgacttcataaccgcttgttcagacgtcagaaaacatgggaaattaggatcgaacgcc
agaaaggattcggcgacgttttccaatagtgatggatacccttgtacattgactgctgcg
aatttacgtcaccagttacagcgatgctacgtttatatacacggagggaaagacgaatcc
ggttgccctgttatttgcttcccacactacccaagtctacatgaaattccggacgaagat
tttaagaacacattactctacttaacacaaacaacgagagcgtctgttgccgatcttgga
tttgttattgttttggacaggaggagggataagtggtcttcactcagaggaacgcttata
cgactcgcggaacattttcctggcaacattagattcgtgtttgttttacgaccacaaggt
ttcttccaaggcgctatctctaatattgggtttcgatggcaaaaagatgatttttcaatg
aaggtaccggttgaaatgttgacacatttggatgagttacatcagcgaatccatccttct
gatttaactaaggattttcaaggcacctttggttatgatcattcaatgtggattaacaac
agaatgcttgttgaaacttttgctacaaaagcaactaccattattacatcacttgaagat
tatggaagtgttctggctgaaagtgaattaccaaacgattccaagtcagcagctgtgctt
ataaactttcaacagataaaaaccaacacacataaagaggaaattcttagtttggagaga
gaagcaaaatcactaagggataaaatctcaaacttaaacatcaacgatgtaaatgcagta
gagtccgacctcatggaatgttatgcaacactcatctctgagacaaatcttacatttgag
aacttctggttgaaatacaaggagaagatgaaacaatgtttagaactacggctctttgaa
gaggattatagagaagtatgttccaagctggaatcaattcagaaacagattgagatgaaa
tactcaagtgttggaatcacagccctgtggatggaaagtcttataagtgatctcactgga
cttgaacaacaaagtaaagaatgtctaacactttgtgaaaatgtgcaaagaagtggttca
gatctggttacagtcggccattatgcagtagactgtatccaacctaagacagatgagctt
agcaacttgtcttcaataattaatgaagaagtttcaagacttcaggattcggtgaaatcc
taccaaacttttctcacccaaatcaacgaggtacgacagtggtgtgaagatggaatgtcc
tttcttgctggtcaagtccttgaaaaaagtttgacattagatggtgcaacgtctgctttt
gatgaattagaaacaaggttcaaaaataaagaaaaaatcattggtattatgaattctgat
gccagtaaactttgtggaagagtttggtcatctgaagcagagggtctatcttcccatgtg
aaatcaaggttagatgaagtaattcaactttacaagaaacgtagagcaagcttgaaaaaa
gtgacaacaaaacatggagatcgacccatacaacttgtagaaccatcgaaaaagacaact
gattcacccaaaacaagcaagcgagaagtaaacagagaaaataaacaaaatgggagggga
acaaaaagaaactcacgattggtgattaccaaacttgaagacaatcaagtctcatcatct
ccaccatcaactcgtaagacacaacatcctaaggttgaaaaacaatctgaaaatcttttt
ttgaagcaacagcatgttatgaaagaattggtgtcaactgagagaacatacatcacagaa
cttaaaagcattgtagagggttacggacaaccgatagatgatcttgaacgctcagatgtt
cctgttgtattacaaggaaaatcaaaagtgttgctaggcaacatgggagatatatatgat
ttccatggcaatgtatttcttgcattattagatgaatgcatggattgtccatctagtgtt
ggaaagtgcttcttggataagaaagaaaattttgagatctactccgagtattgccagaac
agcatcaaatctgagcatcttcgtaatctagtgggtgaacaacatccattctttgtacaa
tgccagaagaatttgggacaccgcttatcattaagtgcattcctactgaagccagttcaa
agagtgacgaaataccaacttttattacagcaaatgctaaagtacagcagcacacactta
aaagaactccaggcagccgtccaagctatgttagaagttcttaaatcagttaatgatgga
atgcatcaagttatgatcactggttacaaaggtgatctaacattacttgggaagttgcat
ctacaagggcagtttacaatgcaagttgatcataagaaatcaagagtaaagagtctaaaa
aggccacggtttagcaaactaatccaacgtcatttatttctctacgatgatgaggtactt
atttgtaaagctcaaacagctgagaatttagatgatgaacacagcaagacgaccaaccca
aatatatccccagttgcaaaagttaaaggattgcaatatttgtataaaaactcaattaag
atgggaagtgctgggatgtctgacactataaaaagcgatgcacgaaaattcgaaatatgg
tcagaaggacgagaacatgtttatactctgcaagccccaacactaaccaccaaacaagag
tgggtgcgagatctaaaaaaagttctatcgtcacaaactaaagttccatttacatcagcc
atagatataaccaatacacaacacggtataatgaaacgaaaatcgtcttgtccgcccaca
actgtagcgtacgtaaaaccaaaacaatcagaaaatgaatcaaaaaattcaaataaagtg
caagtgaaaccaaagcgtgctgcaagtctctgtgtagcagacataaaggttgaatgcagt
gcatcagatttcaagcagctttctcttgatcactaa
DBGET
integrated database retrieval system
