Ciona intestinalis (yellow sea squirt): 100176691
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Entry
100176691 CDS
T01056
Name
(RefSeq) excitatory amino acid transporter 3-like
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100176691
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100176691
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
100176691
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
100176691
NCBI-ProteinID:
XP_002131603
Ensembl:
ENSCING00000005668
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Position
8:complement(5133381..5138503)
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AA seq
519 aa
AA seq
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MPLSTKFRNIEAPSCECSAKCWKAFLKRELLLILTVLAVVFGLVLGIAMREANLSKLDIA
YFAFPGTLFVRMLKMVIVPIIICSLVTAVSTIPKTAASKLGGRAVLYYITTTLLSVIMGI
ILVVSINPGGRLVHNRTGSIRKAEPVDTLLDLVRNLFPTNIVSATFTQEFTTRVPITTKM
NVSVMVQPTMANTTAAYMTAVSEQDVVIDYRLVTASKSGLNALGLICFCLIFGVIIGQMG
KDGEVVVKFFSGANEAVLKMVRMVIWYGPIGIMFLIASKIMAMENPNQELARFGLYMVTV
IVGLIIHGFIVLPIIYAVIVRKNPFSYLGGALQALLTALATASSSATLPVTITCAEKKNN
IDRRVARFVLPIGATINMDGTALYEAVAAIYIAQANGIVLNFGQIIAVSLTATAASIGAA
GVPQAGLVTLIIVLAAVGLPADDIELILAIDWLLDRFRTSINVWGDSVGAAVVNHLLKDD
FKQMDEDELSSSDGNGSTIKHDHVYDNAVMEVEEASSKM
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccactaagcaccaaattccgcaatattgaagcaccgagctgcgaatgctctgcaaaa
tgctggaaagcattcctgaagcgagaattgctcttaatccttacggttcttgccgttgtt
tttggtttggtgctcggtatcgcaatgagggaagcgaatctatccaaactggacatcgct
tattttgcttttccggggacactttttgtgagaatgctaaagatggtgatcgttccgatt
attatctgcagtcttgtgactgctgtgtcaactataccgaagacagcagcttcaaaattg
ggtggccgggcagtgctttattacatcacaaccacacttctttccgtaataatgggaatc
attcttgtcgtttccattaacccaggcggtcggctggtacacaatagaacaggctccatc
cgcaaagcggaaccagtcgacactttattagatcttgtgagaaaccttttcccgacaaac
atagtatctgcaacttttacccaggaatttacaacaagagttccaatcaccaccaaaatg
aacgtatctgtcatggtacaaccaacaatggcgaataccacagccgcatatatgactgct
gtatcagaacaagacgtggttatcgattatagactggtcactgcatccaagtcaggcttg
aatgcgttgggccttatctgcttctgtcttatctttggggtgattatcggtcaaatgggt
aaagatggcgaagtcgtcgtcaagtttttttcgggcgctaacgaggctgttttaaaaatg
gttcgcatggtgatctggtatgggccgatcggtataatgtttcttattgcttccaagatt
atggcaatggaaaatccaaatcaggaacttgctcgctttggcttatacatggtaacagtt
atagtcggcctgatcatccatggttttatagttctgccgatcatctatgcagttatcgta
aggaaaaatccgttcagttatctaggcggtgcactgcaggcgctccttacagctctcgct
acagcttcaagctctgcaaccctgcccgtgacaataacctgcgcggaaaaaaagaacaat
atagaccgtagagttgcaaggttcgttctgccaatcggggccacaattaacatggacggg
acagcactgtacgaggcggtggctgccatttacattgctcaagctaacggcattgttctt
aactttggtcagattattgcagtaagtttaacagcaacagcggcaagcattggagccgca
ggtgtaccacaagcaggtctagtcactctgattatcgtcctagcagcagttggacttcct
gctgatgacattgaacttattctagcaatcgattggctattggatcggttccgcacttcg
atcaacgtttggggagactctgttggagctgctgtcgtaaatcatcttttgaaggatgat
tttaaacaaatggacgaggatgaactgtcgtcgagtgatggtaacggaagcaccattaag
catgatcatgtatacgataatgcagttatggaggtggaagaagcaagctcaaaaatgtaa
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