Ciona intestinalis (yellow sea squirt): 100176697
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Entry
100176697 CDS
T01056
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein-like isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100176697
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100176697
Cilium and associated proteins [BR:
cin03037
]
Other cilia and associated proteins
Stereociliary proteins
100176697
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
100176697
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
100176697
NCBI-ProteinID:
XP_002120261
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MIVTSLIWIVTWITIAPMTSPKPLQRLCTGTDVVDILALSLSEHPDLPTGVEIFKEGGVT
GYRFDPEARLLGVNADVIMTSCNFFPREFSLVVTFRREIPRSENEYLMTLVGQDRHTVLV
GLRLQRNSLNFELVGRSLGERRNVRYEDARFNDGEWHTVVMAVAGSKVKFTIDCMTSSTS
GLIFPQRMSTRGARLHIASRRKKRGRFTGVLRQLKFIAGSDVTRHLCPTSSHTSYPDWFG
VQVYTSKKATTKVVVDDDITMTCTSDNKGQLMYRKQDGDVTMCQEDKWMTIASTQPKLDY
VIEHGSLLTKSKTLDIEVFEVAGEGTFLAAANQGRDRNMASTIYKWESDTKRFVAYQDIA
TETARHFEFFTIESEQFLAVANHEVGNSPTAVSAIYRWNHKRRRFVPHQFIRTFAARNWE
SFQVDGKFYLVVANYAGDNGQKETSWVYMWNPDHRAFIKYQALQTIGAYDVEHFQIGADH
YLAVANSFNGVKTKLDSVIYRWRHSNFVPFQYIETFGATDWEYFVISGRHFIAVANYYDN
SPDRVTYVINSFIFEFQEEINQFVKIQEIPTQGARDIEVFEVGSDSFLVSASASDEHRNH
KSVIYRWQGMEHFVPVHTVPIGPCADWEAFRTSRGEYYLVSANVISRTSAIMRMLTY
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgacgtcactgatatggattgtgacgtggattaccatagcaccgatgacgtca
ccgaaacctttacaaaggctctgcacaggtactgatgttgtggatatattggctttatct
ttaagtgaacatcctgacctcccaaccggtgtggagatatttaaggagggaggagtcaca
gggtacaggtttgaccccgaagcaaggttactcggggtcaacgccgacgtcatcatgacg
tcatgcaatttcttcccgcgcgaattttcattggtcgtgacgttccgtcgggaaattccc
aggagcgagaatgaatacttgatgacgttggtggggcaggaccggcacacggtgttggtt
ggattaagattgcaaagaaattcgttaaactttgagttagttggtcgaagtttgggtgaa
cgtcgtaatgttagatacgaagatgcgaggttcaacgacggggagtggcacacagtggtg
atggcagtagcggggtcaaaagtcaagttcacaatagactgtatgacgtcatctacaagc
ggattaatttttccgcaaagaatgtccaccagaggcgctagacttcacatcgcgagtcga
agaaaaaaacgcgggagatttacaggagtgcttcgacaattgaagttcatcgcgggaagt
gacgttacacgccatctttgtcctacgtcatcacacacgtcatatccggattggttcgga
gttcaagtttacacgagcaaaaaagcaacaacgaaagtggtcgtagatgatgacatcacg
atgacgtgtacatcggataacaaaggacaattaatgtaccggaagcaggatggtgacgtc
acaatgtgtcaagaagacaaatggatgacaatcgcttcgacacagccgaagcttgattac
gtcattgagcatgggtcattgttaacgaaaagtaaaacgctcgacatcgaagtttttgag
gtagcaggggagggaacgtttctcgctgcagccaatcagggacgagatcggaacatggcg
tcgacgatttataagtgggagagcgacaccaagcggtttgtggcgtaccaagatatcgcc
actgaaacagcgcgtcacttcgaattctttacaatcgaaagcgagcaattcctcgctgta
gcgaaccacgaggttgggaattccccgacagcagtgagcgccatctaccggtggaaccac
aaacgccgaagattcgttccgcatcagttcattcgaactttcgccgcaagaaattgggaa
agttttcaagtcgatggtaaattttacctcgtggtggcgaattacgcaggagacaatgga
cagaaagagacgagttgggtttacatgtggaatccagatcatcgcgcgtttattaaatac
caggcgctccaaacaatcggcgcttatgacgtagaacattttcaaatcggagccgaccat
tatctcgctgtagcgaattcgtttaatggcgtcaaaacgaagctcgatagcgtcatctac
cggtggcgacattccaacttcgttcctttccaatatattgagacttttggtgccactgat
tgggaatatttcgtcatatccggtcgccactttatcgctgtagcgaattattacgacaac
agtccagatcgggtcacctacgtcataaacagctttattttcgagtttcaagaagaaata
aatcaattcgtgaaaatccaagaaattccaacccagggcgcccgtgacatcgaagtgttc
gaagtgggttcggattcgttcctcgtttcggcctcggcttcggacgaacaccgaaaccat
aagagcgtcatctaccggtggcaaggtatggaacacttcgttcccgttcacaccgttcca
atcggtccatgtgcagattgggaagctttccgcaccagtcggggtgaatattacctcgtg
tctgcaaacgtcatatcaaggactagcgccatcatgcggatgttaacttattga
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