Ciona intestinalis (yellow sea squirt): 100176727 Help Entry 100176727         CDS       T01056                                  Name (RefSeq) DNA repair endonuclease XPF   KO K10848   DNA excision repair protein ERCC-4 [EC:3.1.-.-] Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03420   Nucleotide excision repair cin03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     100176727    03460 Fanconi anemia pathway     100176727  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cin03032]     100176727    03400 DNA repair and recombination proteins [BR:cin03400]     100176727 DNA replication proteins [BR:cin03032]  Eukaryotic type   DNA Replication Termination Factors    Other termination factors     100176727 DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     Other NER factors      100176727 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ERCC4 HHH_5 Motif Other DBs NCBI-GeneID:  100176727 NCBI-ProteinID:  XP_026691309 Ensembl:  ENSCING00000005673 LinkDB All DBs Position 8:5074515..5083833 Genome browser AA seq 812 aa AA seqDB search MDSTPSVPASTPSTSSADPTASVNLSAPSAPADPTKSSCSTSSVDHTSSMLEYENQIFLD MYQENALLVMCEGLGLDRIFLNFLRLYSDLKELVFVLNTDQLQQEYYIEKLRSLGVNQLP CIMTSEYGAQERKRMYARGGIFFASSRILVMDLLVDRIPVHLVSGMLVTKAHKMADACQE PFILRLFRQKNKEGFIKGFTDNPVALVGGYSRMEKVMKNMFVGKVFLWPRFHLNIIECMD KRKPEVIEIGVELTNSMKIIQTSLLEIVSACLKELKSNNPGVNCFWVNCLPFPKWEILLE ILDEIREANKQTEKTELGEGKVLICVSEMRGIYMIRDFLKFGTRAALLRIYNKAFKKSLL IPTDEGNTKDDLLKKKKKSSEIPTPPDSCEDIFPNSKDDRKTLEENEEIDAIRYRRMKVL DSPETHLHALHGNPDPYILSRALEEIQPRYVILYDSSIHFVRQLEVYKACRPGIPLRVYF LTFQSSAEEQVYLTSLRREKEAFHSLIQEKATMVIPKEREGKNKDDPQFERNVKPAYEIN SRKAGGQGGLVEDKKQTIVVDMREFRSELPSLLHKRGIEIEPITIEVGDYILTPNICVER KSLSDLIGSLGSGRLYTQCVAMSRHYSQPMLLIEFDANKAFSFQARGVAGATLTLKELNQ KLTLLLLHFPKLRLAWCSSPSTAAELFHDLKLTREQPDPEKAAAIGASEPDGSSDEKYNT APYDFLLKLPGINSKNCRSILHHVTDLRHLCRLSEEQLEELLSSKINARQLYEFLHEKYD ASTSKSTDTSAKMKSKRPFGGGKKPFNKFKKK NT seq 2439 nt NT seq  +upstreamnt  +downstreamnt atggattctacaccaagtgttcctgcatcaactccttctacatcttcggctgatcctact gcatcagttaatctttcagcaccatctgctcctgctgatcctacaaaatcatcttgttct acatcatcggttgatcatacatcatcaatgttggaatatgaaaaccagatttttcttgac atgtaccaggaaaatgcccttcttgttatgtgtgagggtcttgggttggatcgaatattc ctcaacttcttgcgtctttattccgatctcaaggaacttgtctttgtgttaaacactgat cagttgcagcaggaatattatatcgaaaaattgaggtctctgggagtaaatcagcttccg tgcatcatgacatccgagtacggagcacaagagaggaagaggatgtatgctagaggtggg atcttttttgcatcttcccgcatcctcgtcatggacctgctggtggatcgtatacccgtt catcttgtttccgggatgctggtgacaaaagctcacaaaatggcggatgcatgtcaggaa ccttttattctgcgtttattccgacagaaaaacaaagaaggatttatcaagggtttcaca gataacccggttgcattggttgggggttacagcaggatggaaaaagttatgaaaaatatg ttcgtgggaaaagttttcttatggccgcgttttcacctcaatattattgagtgtatggac aagcgtaagcctgaagtaatagagataggagttgagttaacaaactccatgaaaataatt caaacttcgttgcttgagattgtgtcggcgtgtttgaaggagctaaagtccaacaatcct ggtgtaaattgcttttgggttaattgtctgccatttccgaagtgggaaattctcctcgaa attttggatgaaattcgtgaagctaataaacaaacagagaaaacagaacttggagagggt aaagttctgatatgtgtaagtgagatgagaggaatctacatgatccgagatttcctcaag tttggaacacgagcagctttgttgaggatttacaacaaagcgtttaagaagtctctgctt atcccaactgatgagggaaacaccaaagatgatctgttaaaaaagaagaaaaagtcgagt gagatcccaactcctccagactcgtgtgaggacatcttccctaactccaaagatgatagg aagactttagaagagaatgaagagattgatgcgatccgataccggagaatgaaagtcctt gattccccggaaacccatcttcacgctcttcacgggaatcctgatccttacatcttgtct cgagcgttagaagagatacaaccaagatatgtgatcttatacgactctagcatccacttt gttcgtcagcttgaggtgtacaaagcatgtcggccaggaattccccttcgtgtatatttc ctaactttccaatcctcagcggaagaacaagtttatttaacatctttacgaagagagaaa gaagcttttcattctctcatccaagaaaaagcgacaatggtaatcccaaaagagagagaa gggaaaaacaaggacgatcctcagtttgaaagaaacgtgaaaccagcgtatgaaataaac tctcgtaaagctggaggacaaggtggtttagttgaagacaagaaacaaaccattgttgtc gacatgcgagagttccgtagcgagcttccatctttgctccacaagagggggatagagatt gaaccgataacgattgaggttggagattacattttgacgccaaatatctgcgttgaacgg aagagtttaagcgatctgattggttcgttgggcagtggtcgtctctatacacaatgtgtc gccatgagtcggcattattcacaacctatgttgcttattgagttcgatgcaaacaaagct ttctctttccaagcacgaggagttgcaggggcaacactgacattgaaggaacttaaccag aagttgacgttacttctacttcactttcctaagttaagactagcttggtgttcctcacct tctacagcagctgagttgtttcatgacctcaaacttacaagagagcaaccagacccagag aaagctgctgccattggagcatcagaacctgacggatcatcagatgagaaatacaacacc gccccttatgactttcttctcaaacttccaggaataaacagcaagaactgtcgtagcatt cttcatcatgtgactgatcttcgtcatctttgtcggctctctgaggaacaactggaggaa cttctgtcgagcaagatcaacgcacggcagctgtatgagttcttgcacgaaaaatacgac gccagcacctcaaaaagtacggacacctcagcgaaaatgaaatctaaacgaccgtttgga ggcgggaagaaaccgttcaacaagttcaagaaaaagtaa

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