Ciona intestinalis (yellow sea squirt): 100176728
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Entry
100176728 CDS
T01056
Name
(RefSeq) intraflagellar transport protein 56-like
KO
K19685
intraflagellar transport protein 56
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100176728
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100176728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
ANAPC3
TPR_2
TPR_14
Coatomer_E
TPR_16
TPR_8
TPR_6
TPR_1
ARM_TT21_2nd
SRP_TPR_like
TPR_7
ARM_TT21_4th
TPR_Slam
TPR_17
TPR_CcmH_CycH
TPR_11
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
100176728
NCBI-ProteinID:
XP_018671875
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MPVLDDFLDKRDYVGAITLLEFQRRCGKVVPHLNMWIAYCWFHLADYKKAYAIYKKMIEK
TDCDPQALINLACCCMYLGLYDEAYTVLNTPQQDNFSILQSRLLFHLSHKLNKERNMMVH
MSRLEDIDDKCSYYSLHFMRGNYEEAINSFKHLLNLDKNFAALKVYLAMCYFKLEYYDVA
QDYLSEYLQQHPGSVLCSNLRACIFFRLYNGKAAEAELRSIKTSTLCCSDVIQHNKVVFG
DGRNARQVLPPLVGVIHEARWNLALFLVKQGGEYKEAYGLLHQHDPKHGQEYLIKAVTMA
SLGQEEGDKNLINSAAHCYKYIVNLGDTVLGRQCMMSSCFLRKEFRQALNYFDSIKGYLY
NDDDFNFNYGQAKLACGKYKEAEE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtacttgatgattttctggataaacgggattatgttggtgcaattactctcttg
gagtttcaaagaagatgtggaaaagttgttccacacctgaacatgtggattgcttactgc
tggtttcatcttgcagattacaaaaaagcatatgcgatttataaaaaaatgattgaaaaa
actgattgtgatcctcaagcattaattaaccttgcgtgttgttgcatgtatcttggacta
tatgatgaagcttacactgttctaaacacaccacagcaagacaacttttcaattttacaa
tctcgattgttgttccatctcagtcacaagctaaacaaggagagaaacatgatggtgcat
atgtcaagattagaagatattgatgataaatgttcctactatagtctacatttcatgaga
gggaactatgaagaagctattaattcattcaaacatcttttaaatcttgacaaaaacttt
gctgctctaaaagtttatttagcgatgtgctattttaagctggaatattatgacgttgca
caggattatttatccgagtacctccagcaacacccaggcagcgttttatgcagcaatcta
cgggcttgtatatttttccgcctttataacggcaaggcagcagaggcagaactaaggtcg
atcaaaacttcaacgttatgttgttcggatgttattcaacataacaaggttgtatttggt
gacggtcgtaacgctcgtcaagttttaccccctcttgtgggggttattcatgaggcaaga
tggaacttagctctcttcttagtaaagcaaggtggtgaatacaaggaagcatatggtcta
cttcatcaacacgacccaaaacacggacaggaatatttgataaaagccgttactatggct
tcactgggacaagaagaaggagacaaaaatttgataaattcagcagctcattgctacaaa
tatattgtcaacttaggagacacagtattgggaagacagtgtatgatgtcatcgtgtttc
cttcggaaagaatttcgtcaagctcttaactacttcgacagtattaaaggatatctttac
aatgatgacgactttaatttcaactatggacaagctaagttggcttgcgggaagtataaa
gaagctgaagag
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