Ciona intestinalis (yellow sea squirt): 100176736
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Entry
100176736 CDS
T01056
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04517
IgSF CAM signaling
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100176736
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100176736
09142 Cell motility
04814 Motor proteins
100176736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100176736
03036 Chromosome and associated proteins [BR:
cin03036
]
100176736
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100176736
04147 Exosome [BR:
cin04147
]
100176736
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100176736
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100176736
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100176736
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100176736
Exosomal proteins of other body fluids (saliva and urine)
100176736
Exosomal proteins of colorectal cancer cells
100176736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100176736
NCBI-ProteinID:
XP_002130303
Ensembl:
ENSCING00000005681
UniProt:
F6XCZ8
LinkDB
All DBs
Position
8:complement(4974445..4977289)
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTVGSGDDSFNTFFSETGSGK
HVPRAVFVDLEPTVVDEIRTGTYRQLFHPEQMITGKEDAANNYARGHYTIGKEIVDTVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVDRPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVGEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIASIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDTADGDGDEDEEDEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaatgtatctccatccacgtcggccaagccggagttcagatcggtaacgcttgc
tgggagttgtactgcctcgagcatggcattcaaccagacggtcaaatgccaagcgataaa
actgtcggcagtggcgatgactcgttcaacactttcttcagcgagaccggttcaggaaaa
cacgtcccacgagccgtatttgttgatttagaacctaccgtagtggacgaaatccgcact
ggtacttaccgccagttgttccaccctgagcaaatgattactggaaaagaagatgccgca
aataactatgcaagaggtcactacactattggtaaagagattgtggacactgttctcgat
cgtatccgaaagttggccgaccaatgcacaggtctgcaaggttttctcatttttcactct
ttcggtggtggaaccggctccggttttgcgtctctattgatggaaagactttccgtcgat
tatgggaagaaatcaaagctggagttcgcggtctacccagcaccgcaggtttcaaccgca
gtggtggaaccttacaattccatcttgaccactcataccacccttgagcattccgattgc
gcatttatggtcgacaacgaggcaatctacgatatctgccgtagaaaccttgacgttgac
cgtccatcttacaccaacctcaaccgtctgatcggtcaaatcgtttcttcaatcactgct
tccctgcgtttcgacggggctctcaacgtcgatttgacagagtttcagaccaacttggtg
ccataccctcgcatccatttcccgttggtcacctacgctccggtcatctcggcagaaaaa
gcttatcacgagcagctttccgttggcgaaatcaccaatgcttgttttgagcccgctaac
cagatggtgaaatgcgatccccgccatggcaagtacatggcatgttgtatgctttaccgt
ggcgatgttgtaccgaaggacgtcaatgctgctattgcttctattaaaacgaaacgtaca
attcagttcgtcgactggtgccccactggtttcaaggttggtataaactaccagccaccc
accgttgtaccaggtggtgatctggcaaaggtccaacgggccgtctgcatgttgagcaac
accacagctattgctgaagcttgggctcgtctcgatcacaagtttgacttgatgtacgcc
aagcgagcattcgttcactggtatgtcggcgagggaatggaagaaggagaattctcggag
gctcgtgaggatctcgctgctctagagaaagattacgaagaggttggagtcgatactgca
gatggagatggcgacgaagacgaagaggacgaatattaa
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