Ciona intestinalis (yellow sea squirt): 100176821
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Entry
100176821 CDS
T01056
Name
(RefSeq) PHD finger protein rhinoceros
KO
K22156
protein Jade-3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100176821
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
HBO1 complex
100176821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
zf-HC5HC2H
PHD_2
EPL1
PHD
SRPRB
Motif
Other DBs
NCBI-GeneID:
100176821
NCBI-ProteinID:
XP_018673012
LinkDB
All DBs
Position
2:complement(4515879..4526381)
Genome browser
AA seq
1890 aa
AA seq
DB search
MTSERKYSRRLPSVSCDEVNISGLGSSLNSHTPSRSRRCSEKHDLEANIDENRTDGDDNN
NNNRSASAYLSKLLDCKDLLNDLDASPSPGNPELEANGFTYNSLKPSTPSTSNMRSAIQR
STSLSQKRQSRIPNRHKPAEIFRKDLISAMKIPDTSQLLNEEYWIMQDPWRIEWEKGVQV
PVNAKSVPTKNIQIVPKETLGDFRMPRKMLKSSPDIGDRDMIDLNVLADSTCRYDLDEMD
VAWLKIINHERKMMGLATLDEFSMEQIMEELETQCHDNMQLAIKTKEGLGIEYDEDVVCD
VCRIPDCEEGNEMVFCDGCNLCVHQACYGILKVPVGSWLCKPCALGIRGSAMCILCNKKG
GAMKSTRSGNKWAHVSCALWIPEITIADPDRMEPITKVSHVPSSRWALLCSICKDRVGAC
IQCSVRHCVTAYHVTCAIEDKLDMIADCGVSPLEGQEDAVIFRSYCKKHSTNRKESDGED
EQTEERIRGMRHRRIMELEQEFYTLVKYQAVANALSIPSQTARDVMEYWKLKRAANFNRP
LITPKHEEGTALAEAAETNLQRRLRMFTHLRQDLERVRNLCYMIGRREKTKRATVKNMES
VFLTQMKYLERCMSRDGKFEPQRMLKTLPKFGQPEVCELARKESVLLAKTPEWNPSTEKN
QRLMPEEKLNNKIEKAAQQQEKTPVKLAEVGETSEQKLVRSPVNSSLRHKNGLHRKAFLT
ACRKHESLSPRKTLPNKTDVKDEVEEKVERVDNRRKRSMRSSDTDSESQSSKPPVKKSQR
AKAWTTWRATGAAASPSAFTIKTEKETNGKEENIVVGKTSKNLPSPRASVGGDASPVIAE
TKPREAAGRVTRQSRLVVKWDSDKTDDPEIVQKTSDDIKQHKTINLRTNKSRIVSSECSS
ESGKNKEVAASRPAACSRTITRSSKSRDSVDNNHSDTPTSRPPLRQSALKAKNDSGALAL
SCDEEAGQELLKPAEDDQENIQVGGAEKRDDEKDEEDVGYRGDMDESDTELTRTPCGRHK
QSHTGHKRPHRLNVKTTDTADSSDYSSRSRILSKTFPSKRKRLKSMQNRTRTDLIKTGVL
FKGFKDPIEGVPRARTRSQTDTSDSNRPKNSGAADDICDRLAHESEHNVTTIVGGHSGNL
IVPASSSSVSHPPPAHVKQEFHPPGLDNFHNPLQTKGFYPTFMPPQPYHYMNPQDIYYTS
IAQYQSHPMWSILTEEQKMKLTQQLSKSLFPTNYYHEPAPNHKSPIQPMPDSTLSPESQP
VLPPAMQMPENVDPQPAIPTLPSACESLPHPSPAIPLNPEPSTQATAHENYPENPTKKNK
KKKKKKSKKKKKKRKRQSSDSYYSSSSFNSDGSYGEFCVEYCSTLDPALQTNNENRADDH
EEISVPTDTTIPQVPVPLTAENVPQPSEEPFVTEIPNKIKPLEQIETTSTPPPPDPGTSK
LLLKIDKKRIVLSQDSDNCDSAEEIKSSSDSSIISEKDSEPSDKEGEEKLIVSPLKLKLS
ATKSDRTLRNGLMPCEYQILEGKIEENILLKSPVKSEPTVSKTPAQPTPQPVTVNQLSWT
SSVPQKVETGAVKRQSSGHVALRRLGLPSQTVESSEVPEKRTLRNRNQPNKAETSTTANK
KAPKQEQKRPSLASVTPMTTEKRKRGRPKKNPNSTTSKTTKPNTAASNANIDAYISISQH
MSDTSSTTTCSSNVQDRLGPLLGKNDEQRSKSFSSDSSKHSSIHPSLQPERHWKKRKVRE
HETSVTKPLPTSPEDILPSPPLSSEIQTQNPDFLVENSKDNSTVEPTTNAAIPNALSEKE
TESTSIKLNTSSAKLPSLRNAPSPTPNKFNTSGVHHTKSSSLSQPSTQVVHLGKKEIKNP
VKPESKISSDISESSKPSSVDVYEFADFGS
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgagcgaaaatattctcgaagactacccagtgtttcgtgcgatgaggttaat
attagtggattaggttcgtcattgaactcacacacaccaagcagaagtagaaggtgttct
gaaaaacatgatcttgaagcaaacattgatgaaaaccgcaccgatggagacgacaacaac
aataacaatcgcagtgcttccgcttacctttccaaactcctcgattgcaaagatttattg
aacgacctcgatgcctccccttcccctggtaacccagagctggaggcaaatggattcaca
tacaactccctgaaaccttctactccaagcacatcaaacatgaggagtgcgattcaacgc
tcaacatcattgtcacagaagagacaaagcagaatcccaaatcgtcataagcctgctgag
atatttcggaaagatctgatcagcgctatgaaaataccggatacttcccagttgttgaat
gaggaatattggatcatgcaagacccttggaggattgaatgggaaaagggagtacaggtt
cctgttaatgcgaaatcggtgccaacgaaaaatatacaaattgttccgaaagaaacattg
ggcgactttcgaatgccacggaagatgttaaaatcaagtcctgacatcggagacagagac
atgattgatctgaatgtattggcggattccacatgtagatatgatttggatgaaatggat
gtagcgtggcttaaaattataaaccatgaaaggaaaatgatgggtcttgccactcttgat
gaattttccatggaacagataatggaggagctggaaacccagtgccacgataacatgcag
cttgccatcaaaaccaaggaaggattaggaatcgaatatgacgaagatgttgtctgtgat
gtttgtaggataccagattgtgaggaagggaatgaaatggttttctgtgatgggtgtaac
ttatgtgttcaccaagcttgttatgggattttgaaggttcctgttggaagttggttgtgc
aagccgtgcgctctcggcatccgtggctccgccatgtgcattctgtgcaataagaaagga
ggagcaatgaagagcacgaggtccggaaacaaatgggcgcatgtgagttgtgctctctgg
attcctgagatcaccatcgctgatcctgatcgaatggaaccaatcacaaaggtatcccat
gtcccatcatcaaggtgggcactcctatgcagtatatgcaaggacagggttggtgcgtgc
attcagtgcagcgtgcgccactgtgtcacagcgtaccacgttacatgtgcaatcgaagac
aaattggatatgatagcagactgcggtgtttcacctttggaaggacaagaggatgccgtc
attttcagatcgtattgtaagaaacacagcaccaataggaaggaaagtgatggagaagat
gaacaaacagaggagaggataagagggatgaggcatcggaggatcatggagcttgagcag
gagttttatactcttgttaaataccaggctgttgcgaatgctttaagcattccatcacaa
acagcacgagatgtaatggagtattggaagttaaaacgagcagcaaatttcaatcgacct
ctcatcacacctaaacatgaggagggcactgcactcgctgaagctgccgaaaccaactta
caacgacgattaaggatgttcacgcatctaaggcaggaccttgagcgtgtgcgtaatttg
tgctatatgattggaagaagagaaaaaaccaaaagagccactgtcaaaaatatggaaagt
gttttcttaacacagatgaagtatttggagcgttgtatgtctcgggatggtaagttcgaa
ccacaaagaatgttgaaaactctccccaagtttgggcaacccgaggtgtgtgaacttgca
cggaaagaatccgttctccttgctaaaactccagagtggaatccctctacggagaaaaac
cagcgcttaatgcctgaagaaaaactaaacaataaaatagaaaaggctgcccaacaacag
gaaaaaactcctgtcaaactggcagaggtcggcgagacttcggaacaaaaacttgtccgg
tccccagtaaactcatcactacggcacaaaaatggactccaccgcaaagcattcctcact
gcgtgtcggaagcatgaatcactcagtcctcggaaaactctccccaacaaaactgatgtt
aaagatgaagtggaggaaaaagtggagagagttgataacaggaggaagaggtcaatgagg
tcctcggacactgacagcgagtcacagtcgagcaaacctccagtaaaaaaatcgcagcga
gcaaaagcgtggactacgtggcgtgcgaccggtgctgctgcttctccttcagcttttacc
attaaaactgaaaaggaaactaatgggaaagaggagaacattgttgtggggaaaacctcg
aaaaacctcccgtcccctcgcgctagtgtagggggtgatgcttctcctgttatagcggag
actaaacctcgtgaagcagctggtcgggtgactcggcaaagtaggctggtcgtcaaatgg
gattcagataaaacagatgacccggaaattgtgcagaaaacttctgatgatattaagcaa
cacaaaactatcaacctacgcaccaacaaatcaagaatagtttcaagtgaatgttcatca
gaaagtggtaaaaacaaggaagttgccgcttcccggcctgcggcttgctcgagaacaatt
acgcgcagttctaaatcacgtgacagtgtggacaataaccacagtgacacgcccacatca
cgccctccactcagacaatcggcgttgaaggcaaaaaacgattcaggggctcttgctcta
tcatgtgatgaggaggcagggcaagagctcctgaaacctgcagaggatgaccaggagaac
atccaggtcggaggagccgagaagagagatgatgagaaagatgaggaagatgttggttac
cgtggcgacatggatgaatccgacaccgaactcacgaggacaccgtgtggccggcacaag
cagagtcacacgggacataaacgaccgcatcggttaaacgtaaaaaccacagacactgca
gattctagtgattactcctccaggtcaaggattttaagtaaaacttttccctccaaacga
aaaagactaaaatcgatgcagaatcgaaccaggacagacctgataaaaactggggttttg
ttcaaaggatttaaagatccaattgaaggggttccgcgagcccgaactcgctcccaaact
gacacaagtgattcaaaccggccaaaaaactccggagccgccgacgatatttgcgataga
ttagcacacgagagtgagcacaatgttaccaccatcgtcggcggccactccggtaacctc
atcgtccccgcttcctcgagttccgtctcgcacccccctcctgcgcatgtcaagcaggag
tttcacccaccagggctggataattttcacaaccccttacaaacaaaggggttttacccc
actttcatgcccccacagccttaccactatatgaaccctcaggatatttattacacttcc
atagcacaataccaaagtcaccccatgtggtcaattctaaccgaagaacagaaaatgaaa
ttaacgcaacaactatctaagagcttattccccacaaattattatcatgagcctgcaccc
aaccacaaatctcctatccagccaatgccagattcaactctttccccagaaagtcaacca
gtcctccctcctgctatgcaaatgcctgagaatgttgatccccagccagccatccccacc
ttaccatctgcatgcgagtctctcccgcacccaagtcctgccattccactgaacccagag
ccctctacacaagcaacagctcatgaaaactaccctgaaaatccaaccaagaaaaacaaa
aagaaaaaaaagaaaaagtcaaaaaagaagaaaaagaagcgaaaacgtcaaagttcggac
tcttattattccagcagcagtttcaacagtgatggcagctacggtgaattctgtgttgaa
tattgctcaacacttgacccagctttgcagacaaacaatgaaaacagggctgacgatcat
gaagaaatttctgttccaactgatacaactataccacaggtaccagtacctttaacggca
gaaaatgtgccccaacccagtgaagaaccttttgtaacagaaataccgaataaaattaaa
cctctcgaacaaattgaaacaacttccacccctcccccaccagatcctggcacctcaaaa
cttcttcttaaaattgacaagaaacgaattgttctgagccaagacagtgataattgtgac
tcagctgaagagatcaagtcttccagtgactcatcaattatttcggaaaaagattctgag
ccttccgacaaggagggtgaggaaaaactaattgtctcaccactcaaactcaagttatcg
gcaacaaaaagtgatagaactttacggaacggccttatgccttgtgaataccagatactg
gaaggtaaaatagaggaaaatattctgttgaaatccccagtaaaatctgaacccactgtg
agcaaaacaccagcacaaccaacgccacagccagtcactgttaatcagctgtcttggacg
agttcagtacctcaaaaagtagaaacaggtgcagtgaagcgtcaaagcagtggccatgtt
gctttaagaaggcttgggttgccgtcacaaactgtagaatcttcagaggtaccagaaaaa
agaacgctgcgaaataggaaccagccaaacaaagcagagactagcactaccgctaataaa
aaagctccaaagcaggaacaaaaacgcccaagtttggcttctgttactcccatgacaact
gagaagagaaaacgtggtagacctaaaaagaatcctaattccactacatccaaaactacg
aaacccaacactgctgcgtcaaacgcgaatatagacgcttacatttccatcagtcaacat
atgtctgacaccagttccaccaccacttgcagctctaatgttcaagacagactgggccct
cttcttggtaagaacgacgagcagaggagcaaatccttctccagtgactcatccaagcat
tcctccattcatcccagcttgcagccagagcgacactggaaaaagcgaaaagtccgagag
catgaaacttccgtgacaaaaccactgcccacatctcctgaagacatcctgccatctcca
cctctttcttcagaaatccaaactcagaatcctgattttttggttgaaaactcaaaagac
aactcaacagtagaaccaacaacaaatgctgccattcctaatgcattatctgaaaaagaa
acagagtcaacatctataaaattgaatactagttcagcaaaacttccaagtttaagaaat
gcaccttctccaactcctaacaagttcaatacctctggtgttcatcacacaaagtcatct
tcattatcgcagccatcaacgcaagttgtacatttgggaaaaaaggaaataaaaaatcca
gtaaaaccagaaagtaaaatatcatctgacatttcggaaagttccaaacctagttcggtt
gacgtttatgaatttgcggactttgggagctga
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integrated database retrieval system
