Ciona intestinalis (yellow sea squirt): 100176836
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Entry
100176836 CDS
T01056
Name
(RefSeq) histone deacetylase complex subunit SAP130 isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100176836
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100176836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
100176836
NCBI-ProteinID:
XP_002129935
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MSVNNTSPTISVSSSVSIGEPYSSNSEMLTAGNAKVSIAPPVVYQAIHKLPQTTISTGGS
TPLIQEPLFSGSKQSFSSTSNSVTASSTVLVTVAPKQMIQAGSIINLAPATGTSIPAAKP
YGKHQLPVRAIPVAGISHVAPKTSAGDAASVTTAFIDPGGGYSTKTLPVQTTLISPAIKP
SKAQPILMAPGLRSPAPSTVKLQQTVYAPNAYHSYPVPAQTHTSNASLSKPAVISVTTPK
VQPGIQIPVRSIYHGRTANPSSSTHDPSTIRRSSNVLYQPTTTISISVPARPNSHFEPPT
SVLQIPAASGRTTCSHGVKPLYQIGLAPPLTTAASTKHQKLIVAHQPTSTVSVTVSSNQN
APFNTSASSVNATSVTAFTYSPASSRLAPNSFITSSSVPVAKVYPQQPPQRVHTLQPSVS
GISAHARPAEFSIPTTIRQASVAMTTTQSSVSRSAVVTTVASTRPQNQPVIPSMLYWQQP
GININIPYAATPNPSYGFRPAVTSVPASQFRINQNLLVMETAASGASSQSVTTFSQSGQP
MSSVSINTIPNDQPRGPPSASHQPHMSPKPAILRRPARSETSVSKKLTLNSTDVHRVGGP
ISPIKMEHSVKENGNVAPKKRFVSNELIYPTPIIKPVIPGQVNLLKPIVTSNGITTISRI
PKINKPSTEFITTNYMKTTVPSDKDPNVIQIGRHTQQTIGEIKIKNEVNFPHSGTVPNHL
LHSHFHSVVKKEQPSKLQEESRVQVFQDVAAVYTVASTSNYPTVHQQQATNRSAFPHPMG
THRQTEPVLRTLRNIKPEPNPTVTGVKRDYDKISAFPMDKSRDPGKQIMHPSIPASLADP
DPSVGLSPRKKPRKQTHIVAKELPDTEQVVDDEMSTDDADEFEDEQPLISMMNNEANAAI
KLEGSNKAKNRLFYFDKQEAIKKVEEEKIKPKQEYTDAEGIRYIQVRKRPPISLLNGHRT
KPVNNHFTHYSDVKVKETKTSLHNPCFNVKRLKGWKIAQLALQLDELALLDVDILRRIST
IKDGLLQHAVHPAGNGIKAAETGCLSPAHTGQGSCLACPITPSVNTNNLTYTPTNFGKTL
SNNSEGASGPTTPTITPVERKANRIREDIFKIEEMAQANIQRSNVMQEQLSEAKTAVMKA
LDHHTLVSKVVEMGRQVQRPKTPSSSSSSRSAKKKKS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaacaacacttccccaactataagtgtgtctagttctgtttccattggagaa
ccatattcaagcaacagtgaaatgctcacagctgggaatgccaaggtgtccattgcacca
cctgttgtataccaagctatacataagctgccccagacaacaatctcaactggtggctct
actccattgatccaggaaccattgttctctggttcaaagcagagtttttcctcgacatca
aattctgttactgctagtagtacagttttagttactgttgcaccaaagcaaatgattcaa
gctggttcaatcataaacttggccccggctactgggacaagtattcctgcagcaaaacct
tacggcaaacatcagttgccagtccgtgcaataccagttgctggtatttcccacgttgca
cctaaaaccagtgcaggagatgcagcatctgtaaccacggcctttattgaccctggtggt
ggttacagcacaaagactcttccggttcagacaaccctaatatctccagccatcaagcca
agcaaagcgcaaccaatactgatggctcctggtttaagaagtccagccccttcaacagta
aagcttcagcagactgtgtatgctcctaatgcataccactcataccctgtacctgcacaa
acgcataccagcaatgcttctctgtccaaacctgcagtcatttcagtaacaacaccaaag
gtgcaaccaggcatacaaatcccggtgcggtccatctatcatggtagaactgcaaatcca
agctcgagtactcatgatccaagcaccatacgaaggtcaagtaatgtattataccaacct
accaccacaatcagcataagtgtaccagcaagaccgaactcccatttcgagccaccaacc
tccgttctacagataccagctgcatctggaagaacaacatgctcacatggagtgaaacca
ttgtatcagattggtcttgctccccccctcaccacagcagccagcactaaacaccaaaag
ttaattgtagctcaccaaccgacttccactgtctctgtcacagtgtcaagcaatcaaaat
gctccgttcaacacaagtgcatcctcagttaacgcaacatccgttactgcattcacatac
tccccagcatcatctcggctcgcaccaaattcattcatcacttcatcttctgtacctgtc
gcaaaagtctaccctcaacaacccccacaaagggttcacacactgcagccttctgtaagt
ggtatctctgctcatgcgcgaccggcagaattcagcatcccaaccacaatccggcaagcc
agtgttgccatgactaccacccaatcatctgtatctcgttccgctgttgtaacaactgtt
gcttcaacaaggcctcaaaaccaaccagtcattccttcaatgttatactggcaacaacca
ggcattaacatcaacataccatacgctgcaacccctaacccatcatatggattcagacct
gctgttacaagtgttcctgcttcacaattccgaattaatcaaaatttgctggtgatggaa
acggctgcatcaggtgccagctcacaaagtgttacaacattttcgcaaagtggtcaacct
atgtcttccgtttcaataaacacgataccgaacgaccaaccacgtggccccccttctgct
tcccaccaaccccacatgtcacctaaacctgccatactgaggagacctgcaagaagtgaa
accagtgtcagcaagaagctcacgttaaacagcaccgatgtccaccgtgttggaggtccc
atatctcccattaaaatggaacacagtgtaaaagaaaatgggaatgttgcccctaaaaaa
cgttttgtttcaaatgagttaatttatccgacgccaatcattaaaccagttattcctggt
caagtgaatctgctcaagccaatagtaacaagcaacggcattacaactatatctagaata
ccaaaaataaacaaaccgtccacagaattcatcaccactaactacatgaagaccacagtt
ccaagtgataaagatccaaatgtgatacaaatcggtcgccacacgcaacaaactataggt
gaaataaagatcaaaaatgaagtcaattttcctcactctggtacagtgccaaaccacttg
ctgcattcccacttccattcagttgtgaagaaggagcaaccttctaagttacaggaggag
tcgagagtccaagtgttccaggatgttgctgcagtttatacagttgcctccacttccaac
tatccaacagttcatcaacagcaagccaccaatcgaagtgccttccctcatccgatggga
acacacaggcagacagagcctgttctccggactcttaggaacattaaaccagagccgaat
cccactgtaaccggagtaaaacgagattatgataagatctctgcgtttcctatggataag
agcagggatccagggaagcagatcatgcatccttctatccccgcatcactggctgatcct
gatccttcagttggtttgtcaccaaggaagaaaccacggaagcaaactcacattgtggca
aaagaacttccggacaccgagcaagtggtggatgatgagatgtcaacagatgatgcagat
gagtttgaggatgagcaacctctcatctcaatgatgaacaatgaagccaatgccgcaatc
aaacttgaaggttcaaacaaagcaaagaaccgattgttttacttcgataagcaagaagca
ataaaaaaggtggaagaggaaaaaattaaacccaaacaagaatacacagatgcagaaggc
ataaggtacatccaagtgcgtaagaggccgcccatatctttactaaacggccaccgaacg
aagccagtgaataatcatttcacccattatagtgatgtcaaagtaaaagaaaccaaaact
tctttacacaatccatgcttcaacgtgaagcgactgaaaggctggaaaatagcgcagttg
gctcttcaattggacgaactggcgctactagatgttgacatcctacgccgtatttcgacg
atcaaagacggccttcttcagcatgcagttcatcctgccgggaacgggattaaggcggct
gagaccggttgtctttctccagcgcatactggtcaaggcagttgcctcgcttgccctata
acgccttctgtcaacacaaacaatctaacttacaccccgaccaacttcggcaaaacacta
agcaataacagtgaaggtgcttctggtcccaccacgcccaccattacacctgttgagcgg
aaagccaacagaattcgggaggacatctttaaaattgaagaaatggctcaggcgaacata
cagcgcagtaacgtgatgcaagagcaactgagcgaagccaagactgctgtgatgaaagcg
ctcgaccatcacacgctagtgagtaaagtggtcgagatgggaaggcaagtgcagaggccc
aaaacaccatcctcgtcgtcttcgtcgcggtctgcgaagaagaaaaagagctag
DBGET
integrated database retrieval system
