Ciona intestinalis (yellow sea squirt): 100176847
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Entry
100176847 CDS
T01056
Name
(RefSeq) CUGBP Elav-like family member 3 isoform X5
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100176847
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100176847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
Motif
Other DBs
NCBI-GeneID:
100176847
NCBI-ProteinID:
XP_002130974
Ensembl:
ENSCING00000001999
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Position
6:complement(144716..157901)
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AA seq
539 aa
AA seq
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MAMTVHGQYMQHALTPVMSSNVPVAVHHDNSAVTFGGHSFVYPQVPVLPQHCGSIMSNTH
SHPLKETPEKDDDAVKLFIGQVPKNWEEKELRQVFAPFGEIFELSVLRDKYTGMHKGCAF
LTYTQKTSAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGAEDRKLFVGMLGKRQNEDDV
RILFEPFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQTMPGASSSLVVK
FADTDKERAVRRMQQMAQTYGLISPVPLQIGTYGLPYAQQNVVPATPGWNSLASPQPAAI
NGLAPAAATVIQQPTVIHHQHATPMSGVPSTPQSPVAPLTTLNLLPPPSSATASTPEGVY
PIQAYPGTQGVAPRVPEHASTPMSQSPPSIELSQAYAQPQPYTVVYVPAQSYGAPQYAPT
VAPVAQSITANQLQTNALLASSTNAPQKEGPDGCNLFIYHLPQEFSDADLANVFQPFGNV
ISAKVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgacagtccatggacagtacatgcaacatgctttaacgccagtgatgagtagt
aacgtacctgtagcagtacaccatgataattctgcagtaacattcggtggtcacagtttt
gtatacccccaagttcccgtactgccacaacactgcggtagcataatgagcaacacacat
tctcacccattaaaagaaacgccggaaaaagacgacgacgctgttaaactgtttattggt
caagtgccaaagaattgggaggaaaaagaactacgtcaagtgtttgcaccgttcggtgaa
atattcgaactttcggttttacgagacaaatatacaggcatgcataaaggctgtgctttt
cttacatatacccaaaagacttctgctatgaacgcacaaaacagtctacatgaaagaaaa
acacttccggggatgaatcatcctattcaagtcaaaccagcagatactgtgagcaaagga
gcagaagatcgaaaattattcgttggtatgctcggtaaaagacagaacgaagacgacgtg
cgcattttattcgagcctttcggtacaattgaagagtgcactatattaagaactccagaa
ggtcaaagcaaaggctgtgcgtttgtaaagctatcgtgtcatcaagaagctaaatctgcc
atggaagctttgcatgggagccagactatgccgggggcgtcttcgagtcttgttgtgaaa
ttcgccgacacggataaagaacgagcagttcgtcgaatgcaacagatggctcaaacctat
ggtcttatcagtccagttccactgcaaataggcacatatggtctaccatatgcacaacag
aacgtggtgccagccacaccagggtggaattcgcttgcttctccccaacctgctgctatt
aatggccttgcacctgccgctgctactgttatacaacagccgactgtgatacatcaccaa
cacgctacacctatgagcggggtccctagcaccccccaaagccccgtagcccccctaact
acgcttaacttgctcccgcccccatccagtgctactgcctcgaccccagaaggggtttac
cccattcaggcctacccaggtacccaaggggttgcaccccgtgtgcccgagcatgccagc
actccaatgtctcagtcaccaccttcgatcgagttgtcgcaagcatacgctcaaccgcag
ccgtatacagtggtatatgtacctgcccaatcgtatggtgcgccacaatacgcaccaact
gtagcacctgtagcacaaagtattacggcaaaccaactgcaaacaaatgccctgctcgcc
agtagcacgaacgccccacaaaaagaagggcctgatggttgcaacttatttatctaccac
ctaccacaagaattctccgacgctgacctggctaacgttttccaaccgtttgggaatgtt
atatcggcaaaagtgttcatagaccgagcaaccaaccaaagcaaatgtttcggtttcgtc
agtttcgataacgctattagttcccaagctgccattcaaaccatgaacgggtttcaaatc
gggatgaaacgtctgaaggttcagcttaaacggccaaaggagcagagtcgaccgtattaa
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