Ciona intestinalis (yellow sea squirt): 100176942
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Entry
100176942 CDS
T01056
Name
(RefSeq) COP9 signalosome complex subunit 1
KO
K12175
COP9 signalosome complex subunit 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100176942
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
100176942
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
TPR_1
DDRGK
Motif
Other DBs
NCBI-GeneID:
100176942
NCBI-ProteinID:
XP_026689416
Ensembl:
ENSCING00000009475
UniProt:
F7AEY7
LinkDB
All DBs
Position
3:830596..836765
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AA seq
475 aa
AA seq
DB search
MPLPTLGLFNSVSLPSLAVEPMQVDGEPEESNEQPREANFTVEAPTLDLDAYASSYSGIM
RIERLVFVATHAPTLRVEALRMACAYVKKTINVTYYQEIHEKLVDAMRNDESNFANQIPT
LDQFWVEQTSKHASTLLEKLDIDLKNCKSNSIKESIRRGFDDLGSHYLNMGDLSNALKCY
SRARDYCTCPKHIVNMCLNVIKVCVYLGNWSHVLTFVNKAEAIGDFNEKERDQQSQAIFT
KLKCAAGLAQFATGKFKMAAKSFLQASVDHCDFPELLSPNNVAVYGSLCALATFSREELQ
ASVISSSSFKLLLELEPTIREIVFAFYKSQYGRCLLLLQSGRDNHLLDLYLSLHLDQLIA
KIRCRALIQYFSPYKLADMQKMATAFNCSVNELEDELMPLILDGQIQARIDSQNKILHAR
DTDDRSLTFARTLDLGKEYLHRTKALILRNAVIRNNISVQIAPSKDAEATSSAAR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcctttaccaacgttgggactttttaattcagtttctttgccgagcttggctgttgag
ccaatgcaagtagatggtgagccagaagaaagtaacgaacaaccacgagaagcaaacttc
actgtggaggcgccgacattggatttggatgcttatgcttcttcctactctggtatcatg
aggattgagcggcttgtgtttgttgcaacacatgctcctacactcagggtagaagcgtta
agaatggcttgcgcttatgtaaaaaagacaatcaatgtaacctattaccaagaaattcat
gaaaaactggtggatgcaatgcgtaatgatgaaagcaacttcgcgaaccagatcccaact
ctggatcaattctgggttgaacaaacttccaaacatgcgagtacattgctagaaaaactt
gacattgatttaaagaactgtaaaagcaattcaattaaagaaagcataaggagagggttt
gatgaccttggcagtcactacctgaatatgggagatttaagcaacgccctaaaatgctac
agcagagctagagattattgtacttgcccaaaacatattgttaatatgtgtctcaatgtt
attaaggtttgtgtttatcttggaaattggtcgcatgtgttgacctttgtcaacaaagct
gaagcaatcggagattttaatgaaaaggaaagagatcaacaaagtcaagcaatatttact
aagttgaaatgtgcagctggattggcacaatttgcgaccggtaaatttaaaatggctgcc
aagagctttctacaagcctctgttgaccactgtgacttcccagagcttctgtctccaaat
aatgttgctgtgtatggtagtctgtgtgcgcttgctacctttagtcgggaggaattgcaa
gcttctgtgatatccagcagttcatttaaactactgctggaattggagccaacaattcga
gaaattgtctttgcgttttataaatcacagtacggtagatgcttgttgttgctacaaagt
gggagagacaaccatctgcttgatctttatctatctttgcatcttgaccagttaattgca
aagattcgctgcagggccttgatacagtacttcagcccttacaagttagcagatatgcag
aaaatggcgactgcgtttaactgtagtgtgaacgaattggaagatgaactgatgcctctc
atactcgatggacagattcaagcaagaattgattctcagaataagatacttcatgcaaga
gataccgatgacagaagtttgacattcgctcgtacacttgatttagggaaggaatatctt
cacagaactaaagctctgatcctacgcaacgctgttattcgaaacaacatatctgtgcaa
atcgctccatcaaaagacgctgaagctactagtagcgctgcaaggtga
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