Ciona intestinalis (yellow sea squirt): 100177031
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Entry
100177031 CDS
T01056
Name
(RefSeq) protein dispatched homolog 1-like
KO
K24680
protein dispatched 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cin04990
]
100177031
Domain-containing proteins not elsewhere classified [BR:
cin04990
]
Other domain-containing proteins
Patched domain-containing proteins
100177031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
Ribosomal_L12_N
Motif
Other DBs
NCBI-GeneID:
100177031
NCBI-ProteinID:
XP_002125616
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All DBs
Position
11:complement(4080622..4087450)
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AA seq
1048 aa
AA seq
DB search
MSGNRNKQSYEDVLKNIERKRINRENEELNIGWYCWLLSEYPALIIFLCVCLSSTLLVVT
LVYGELPDFSDPAKGFEVRGTELSDRLVTWENMMNQTGYNSTLSNYPYVYLKRKALMGKA
RKKNKRKKKKKKNRMKRSFNEDWNFITDGYTCPNSREPIVKLGYSRWIYEATDGVTLWSL
QSLLQMCKTAHQILDHQEYPEVCLRKTLSSCCPTISLANHVAYISGVKSCFNLTQDDVLK
AEQVLMLCAPYYCSGDLQLGCNSSDLNTLNRYMSGSRCGNVPGVCTDAVYNIFHYLIQGS
LCTNHSMRFNFTLSSVFLPAYTGKGMLDLYYDKFHNQPQQNSIRVSSIDFGVDGLVFEDL
LLADSIYPGVAMLLLLVIVWIYTSSLFITTMHLVATTAAMVTSYFIYQFIFDVTFFPFLN
LTSTLVMLGLSTDHILVLYSTWKRCCSEDKVYERVTTKHPVGRRIGVVAKSTMRHVGWSL
FVTSFTTSSAFFSNAWSSVSAIKCFGIYTGLAVLCNLIFALTWLPASIIFHHKYLQFTCN
TKSVFCCIIRLFTRIRNQASEVSRVFFHQIQVLLVVRFRILWVTFFTLLAITSMYIVVFN
PGFQLPRSASYLQFFEQKHLFEQYPLQQRYFDFDKDYKGFLSVRFIFGIEPIDDGNPRNP
DDKGNIHFTRFNVSDPQSQRWLLNFCTILRSHKFYREPENSQFSSMCFIETLKKWIESRP
CKTGAPCCKMTKFPYKPNVFELCLKEAISRLNVVPQLQLFPSSPGPRFDSKDSIRSVIIE
FPTNQKTSSTQSEIAEFVKEIEETLQVHVDSAPRTLAGGWFVSSLNLYALQTSLYTGTLT
SVGISLLVAQIVILITSRNLVVSIFVNLSIGGVIFVTVATLALAGWELNVLESVTVSISV
GLSVDFTAHYAIAYLLAPEKSDRQRRVEHALARIGSAIATAAFTTFLAGLGMLPASVLAY
KRFGIFLMVIMTSSWVYSNYFFLGLLSLLGPQGNCGSLSCLSQKRNENEEHTTTLITEST
SVRPALIEGRTISTEPSSINHNGGNVPE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggaataggaacaagcaatcttacgaagatgtcttgaaaaacattgaacgcaaa
cgaatcaacagagaaaacgaagagcttaatattggatggtactgttggcttctgtccgaa
tacccagctcttattatctttctttgcgtttgtctttcatcaaccttgcttgttgttacc
ctcgtatatggagaacttcctgactttagtgatccagccaaaggttttgaagttcgtggc
accgaattatccgatagattggtgacatgggagaatatgatgaaccaaactggttacaac
tcaactctgtcaaactatccgtatgtttatttaaaaagaaaggcactgatgggaaaggca
agaaaaaagaataaacgaaagaaaaagaagaaaaagaatcgaatgaaaagatcatttaat
gaggattggaacttcattactgatggttacacttgcccaaattcaagggaaccaattgta
aaacttgggtactcaagatggatatacgaagccaccgatggagtcacgctgtggtccctg
caatcattgcttcaaatgtgtaagacagcgcaccaaattttggaccaccaagaataccca
gaagtttgtttacgtaaaaccttatcgtcatgctgccctactatatctcttgccaatcat
gttgcttatataagcggcgtcaaaagttgttttaacttgacccaagatgatgtcctaaaa
gctgagcaagttcttatgttgtgtgccccctattactgctcaggtgatcttcagttaggt
tgcaactcaagtgacttaaacaccttgaatcgttacatgtctggctcaaggtgtggaaat
gtaccaggcgtgtgtacagatgctgtttacaatatatttcactacctcatacaaggctct
ttatgtacaaaccactctatgcgtttcaatttcacattatcttcagtatttttaccagca
tatactggaaaaggaatgttagatttatattatgataaattccacaaccaacctcaacaa
aacagcatcagagtgtcatccattgactttggggttgatggtttagtgttcgaggacctt
ctacttgcagattccatctatccaggtgttgccatgttgttgttgttggtcatagtttgg
atttacacaagttccttattcattacaaccatgcaccttgtagctaccacggcagctatg
gtcacttcttattttatttatcagtttatattcgatgtgacattctttccattccttaac
ctgacaagcacactggtaatgctgggactttcaactgatcatatccttgtcttatactca
acatggaaaaggtgttgcagtgaggataaagtttacgaacgagtgaccacaaaacaccca
gttggtcgcaggattggagttgtagcaaagtcaaccatgcgacatgttggttggtcattg
tttgttacaagttttacaacttcttcagcctttttctccaatgcttggagttctgtctct
gccattaaatgctttggtatctacaccggtcttgccgtgctttgtaatcttatatttgcc
ctaacttggctacctgcttcaataatatttcaccacaagtacctacaatttacctgcaac
acaaagtcagtgttttgctgcatcatacgtctcttcactcgcattcgaaaccaagcatcc
gaagtatccagggtattttttcaccaaattcaagtattactagttgttcgtttccgtatt
ctgtgggtcaccttcttcacccttctagctattacatcaatgtacatcgttgtattcaac
ccaggtttccaactgcctcgatcagcatcttatcttcagttctttgaacaaaagcacctg
tttgaacaatacccactccagcagcgttatttcgattttgataaagattacaaaggtttc
ctcagtgtaaggtttatctttggcatcgaaccaatagatgacgggaatccaaggaatcca
gatgacaaaggcaacattcacttcacccgattcaatgtctcagatccacaaagccaacga
tggctgttaaacttctgcaccattttacgatcacacaaattctacagagaaccagaaaac
agccagttcagctcaatgtgttttatagaaacattgaagaaatggattgagtctcgccca
tgtaaaactggcgctccttgctgcaaaatgacaaagttcccatacaagcctaatgtgttt
gaactttgcttgaaagaagcaatctcaagacttaatgtggtcccacaactacagctgttc
ccaagttccccgggaccaaggtttgattcgaaagattcgattcgaagtgtcatcattgaa
tttccaaccaatcagaaaacttcttccacccaaagcgaaatagcggaatttgtcaaagaa
attgaagaaactttgcaagttcatgtggattctgcgcctcgcactttagctggggggtgg
tttgtcagttctttaaatctgtatgcattacagactagtttatacaccggcaccctgacc
tcagttgggatatctttgcttgttgcccagattgttattttgataacatcacgtaactta
gtcgtcagcatatttgtaaacctttcaatagggggtgtcatctttgtaactgtggctaca
cttgctttagctggctgggaattaaatgtattagaatctgtaacagtttccatctctgtt
gggctctcagttgactttactgcacattatgcaattgcttatctacttgcacctgagaaa
agtgacagacagagacgagtggagcacgctcttgcaaggataggttctgccatcgccact
gctgctttcacgacttttctagcaggattaggaatgcttccagcatctgtgcttgcttat
aaaagatttggaatatttctgatggtgatcatgacatcaagttgggtttacagcaactat
ttttttcttgggttgttgagtttgctgggaccgcaagggaattgtggcagtttgtcgtgt
ttgtcgcagaaaaggaatgaaaatgaggaacacacaactacgttaattacagagtcaaca
agtgtccgacctgcactcattgaaggaagaactatcagcaccgaaccatcatctattaat
cataatggtggcaatgttcctgaatga
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