Ciona intestinalis (yellow sea squirt): 100177094
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Entry
100177094 CDS
T01056
Name
(RefSeq) transcription termination factor 2-like
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100177094
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100177094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
CSD
GmrSD_N
MoaF_like
Phage_TAC_16
Motif
Other DBs
NCBI-GeneID:
100177094
NCBI-ProteinID:
XP_002124935
LinkDB
All DBs
Position
10:4064956..4073874
Genome browser
AA seq
1071 aa
AA seq
DB search
MIGTIQSYDQRRRAGFIQGKDGDSLYYFSKSSVSDNSLHIHPGVDIEFEPYEYGDKTVAV
RIRRSKFNELNTAHHKSQTYSQGHSRNNELFSNYPGPNALPHHYNANPKQNSHGIKNHAT
TNYMSNHSHSSSYDQSYDNSSMPRSKEHGEGMALKHTSHHKPVHQKIGGESQDSFYSHAK
TERGLKNVNRMLQNQEQDSLYSNAESERGLKNVNRMLRNDEQKNVPLEKKMNEMHISQAG
YSLKNIALVQPLSKETGPKNRGDARVYQSSIKQHFTPVKEGKSAPQSQQKPLTKDQQILL
TQIEQNKKLLRGLDLSKLPDRGKRMKDKISNLEAQFTEMRLKQPEEEVNIFKDREVPVIK
QSSEHRRAILIDLTDESDAVRGAGHEVMPRNHVDNYYGGRMTANRLNAVTRVTSEAIELL
HTSLETCPPAASEVSDPKGLKVKLMTHQRQALAWLIWREKESISGGILADDMGLGKTLTM
ISLILKQLQKADLVKKEVKTEVKSEVSDVNQVVKIKEEAPSEATNEKAVKSEVKTKITSK
YFNVKKEVKDEVSEDPKNEDEIENLFPSNSTLILAPASLIFHWKNEINNRCHKDLLSIHL
YHGKDRERDAEKLAEFDVVITTYDVVRRTHPKPPKQTGLTTDTKPVTIDTKSDPLEHALF
LIKWRRVILDEAHQIRNFKSQTSMAACALNAHSRWAMSGTPVQNQESDMYAMIKFLHCSP
FDEHKLWKNQVSNNTTRGQQRLKTLVSCLVLRREKNQRGLDGKPLVKLPERKFEVHKLKL
NDVEREVYDKLKSESQAAYKSYEHSKDGSHRTNHIEEKKKMSATTLLVMLLRLRQCCGHL
HLLQDTFDPELLQKEKEEIAVEDLFQSMNIGASASSFSSDKYSDKSKAKYFEISQPSSKI
TFVMDTLKKLSVEKPDDKCVIISQWTSMLNILAHHLAAAKFSYAVIDGSVNARKRMELVD
NFNKNPVKPKIMLISLQAGGVGLNLIGGNHLFLLDMHWNPALEKQAFDRIYRVGQKKEVF
VHKFIMEETVEEQILQLQERKLSIAKAVMEGAGVENKVKLTLADMKVLFGI
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaacaatacagtcttatgaccaacgacgtagagctggttttattcaaggaaaa
gatggtgattctctttattacttttcgaaatccagtgtgtcagataacagcctacacatt
catcctggcgtagatattgaatttgagccgtatgagtatggagataaaacagttgctgtc
agaattcgaaggagtaagtttaatgaactgaacacagcacatcacaaatcgcagacttat
tcccagggtcattccagaaacaatgagttattttctaattatcctggacctaatgcactt
ccccaccattataatgcaaacccaaaacagaattcacatggtataaaaaaccatgccaca
acaaactatatgtccaaccattcacattcaagcagctatgaccagtcatatgataacagc
tccatgcctagaagcaaagagcatggtgaaggtatggctttgaaacatacttctcaccac
aaacctgtacatcagaaaataggtggagagtcacaagattctttctattcccatgcgaaa
acggaaaggggtcttaaaaatgtaaatagaatgctacaaaatcaagaacaagattcttta
tattccaatgcagaatctgaaaggggtcttaaaaatgtaaatagaatgctacggaatgat
gaacagaaaaatgtccctcttgaaaaaaagatgaatgaaatgcatatctctcaagctggt
tactcgcttaaaaacattgcattggttcaaccgctttcaaaagaaacaggcccgaaaaat
agaggtgatgcaagagtgtatcaatccagtataaaacaacactttacgcctgtaaaagaa
gggaaaagtgctccacaatcgcagcaaaaacctctaacaaaagaccagcaaatattactg
acacaaatagagcaaaacaaaaaacttttacgaggtttagacctttcaaagctgcctgac
agaggaaaacgaatgaaagataaaatttcaaatttagaagctcaatttactgagatgcga
ctgaaacaacctgaagaagaagtcaacatcttcaaggatcgagaggtccctgtgataaaa
cagtcctccgagcacagaagagctattcttattgatttaactgacgaatcagatgctgtg
agaggtgcaggccatgaagtaatgcctaggaatcatgtggataactattatggtgggaga
atgactgccaatcgacttaatgctgtcacaagggttaccagtgaagctattgagttacta
cacacctcattggagacatgccctcctgctgcaagtgaagtttctgacccaaagggctta
aaagttaaacttatgactcatcaaaggcaagcattggcttggttaatttggagagaaaaa
gaatcaatttctggcggaatcctcgcagatgatatgggacttggcaaaacattgaccatg
atttcactgattctcaaacagcttcaaaaagctgatttggtcaaaaaagaagtaaaaacc
gaagtaaaatcagaagtttccgatgtaaatcaagtggtcaagataaaggaggaagctcca
tcagaagcaacaaatgaaaaagctgtaaaatcggaagtgaaaacaaaaataacatcaaaa
tactttaatgtcaagaaggaagtaaaagatgaagtttctgaagatccgaaaaatgaagat
gaaatagaaaatttgtttccatcgaactccacgttgatcctcgctcctgcatcacttatc
ttccactggaagaatgagattaataatcgttgtcataaagatttgctcagcattcatctt
taccatggtaaagatagagagagagatgcagaaaaacttgcagagttcgatgttgtgatt
actacatatgatgttgtcagacgaactcatccgaaaccaccaaaacaaacgggtttaacc
accgacaccaaacctgtaactattgacacaaaatctgatccattagagcatgcattgttc
cttataaagtggcggcgtgtaatactagatgaggcacatcagatcaggaattttaaaagt
caaacttccatggctgcttgtgcattgaatgctcattcaagatgggctatgtctggcaca
ccggtacagaaccaggaatcggacatgtacgctatgattaagttcttacattgctcacca
tttgatgaacataagttatggaagaatcaagtcagcaacaacacaacgcgtggacagcag
cggttaaagacgcttgtatcatgccttgtgctgagaagagaaaagaatcagcgtggattg
gacggaaaacctctcgtaaaacttcctgagaggaaatttgaagttcataagttgaagctg
aatgatgttgaacgcgaagtgtatgataaactcaaatctgaatcacaagctgcatacaag
tcatatgagcatagtaaagatggctcacacagaaccaaccatattgaagagaagaaaaaa
atgtcagcgaccactttgctggtcatgttgttaaggttacgtcaatgttgcggccatctt
catttactacaagatacttttgaccctgagttactacagaaagagaaagaagaaatcgct
gttgaagatttgtttcaatcaatgaacattggagcttcagcctcttcattttcaagtgac
aaatactcagacaagagcaaagcaaagtattttgaaatttcccaaccaagcagtaaaata
acttttgtaatggatactctgaagaaattatctgttgagaagccagatgataaatgcgtg
atcatcagccaatggacgagcatgctcaacatactggcacaccacttggcggcagcaaag
ttctcgtatgctgtaatagacggaagtgtcaatgcaaggaaacgaatggagctggtcgat
aactttaacaaaaatccagtcaaaccaaaaataatgttgatatcactacaagctggtgga
gttggattaaacttgattggtggaaatcatctatttctgttggacatgcattggaaccca
gcattggaaaagcaggcatttgatcgcatttaccgagttggacaaaagaaagaagttttt
gttcacaagtttatcatggaggaaacagttgaggaacaaatactgcaactgcaagaaaga
aaactctcgattgcgaaagctgtgatggaaggtgctggtgttgaaaacaaagtcaaactt
actctggccgacatgaaagtgttgtttggaatttaa
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integrated database retrieval system
