Ciona intestinalis (yellow sea squirt): 100177096
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Entry
100177096 CDS
T01056
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X2
KO
K14411
RNA-binding protein Musashi
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100177096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100177096
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100177096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100177096
NCBI-ProteinID:
XP_009860071
LinkDB
All DBs
Position
10:4429764..4445971
Genome browser
AA seq
414 aa
AA seq
DB search
MTDIPESPMLATVGPDTADPRKVFVGGLSWQTSSEGLKEYFSRFGEVSDAMVMRDPITKR
SRGFGFVSYAEPKDVDKMLEQGQHVLDQKPIDPKIAVPRKDQTRMVTRTKKIFVGGLSAN
TVVDDLKNYFGTYGKVEDAMLMFDKQTNRHRGFGFVTFDNEEPVEKVCEIHFHEINNKMV
ECKKAQPKEVMLPTLARGTARRTYVDPSSAYVLAAGIPGLAYGRPAAAAATAYAYPSAYA
AYPGALSFVDPAATATGTGAFYHPSFALAPSPAPAQALYTPDATTAMAGLARVGVAPVPG
RLEALATPTAGNLTQPASVADIKRDFVASVLSSYAHGAAAPAFASYHPSPSPGARAFANG
TTAGEILTSADPALAQHYIGQNASPQPGLTATIPGGLAGHFASQGPLIAGLTYP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgacagatattcccgaaagcccaatgctggcaacagttggaccggacacagcggaccca
agaaaggtcttcgttgggggtcttagctggcaaaccagctcagaaggcttgaaggaatat
tttagtcggtttggggaagtatctgacgccatggttatgagagaccctattactaaacgt
tccaggggctttggatttgtatcttatgctgaaccgaaagacgtcgataagatgttggaa
caaggacagcatgttctagatcaaaagcccattgacccgaaaattgctgtgccacggaaa
gaccagactcggatggtgacaaggacgaaaaaaatatttgttggtggattgtccgccaac
acagtggttgatgatctcaaaaactacttcggaacatacggcaaggttgaagatgcaatg
ctaatgttcgacaaacagacgaaccgccacagagggtttggcttcgtaacttttgacaac
gaagagccggtcgaaaaggtttgcgaaattcacttccacgaaatcaacaacaaaatggtc
gagtgcaaaaaagcacaacctaaagaagtaatgttgccaactttggcgagaggaacagca
aggaggacttacgttgacccatcatcggcgtatgtgttagcggcaggcattccaggtttg
gcatacggacgaccagcagcggcagcagccacagcgtatgcttacccatctgcatatgcg
gcttatccaggagctctgagtttcgtggacccagcggcgaccgctacgggcactggggct
ttttaccaccccagttttgccctagccccatcccctgctcctgcccaagcgctctatacc
cccgatgctacaacagcgatggcagggcttgccagagtcggtgtggcgccagttccgggg
cgtctggaggccctggccacccctacagcaggcaacttaacacagccggcctcagtagct
gatataaaacgagactttgttgcatcagtactaagtagctacgcccatggagctgcagct
cctgcctttgccagctaccatccttcgccctctcctggtgctagggcgttcgctaacgga
acaacagcaggcgaaatattaacctccgctgacccagcgctagctcaacactacatcggg
cagaacgcatctcctcagccgggtttgaccgccacgattcccgggggactggccggtcat
ttcgcctcgcaaggaccactgatagctggcctcacgtacccttaa
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