Ciona intestinalis (yellow sea squirt): 100177129
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Entry
100177129 CDS
T01056
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100177129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100177129
03016 Transfer RNA biogenesis [BR:
cin03016
]
100177129
03012 Translation factors [BR:
cin03012
]
100177129
04131 Membrane trafficking [BR:
cin04131
]
100177129
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100177129
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100177129
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100177129
Translation factors [BR:
cin03012
]
Eukaryotic type
Elongation factors
100177129
Membrane trafficking [BR:
cin04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
100177129
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
100177129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
100177129
NCBI-ProteinID:
XP_002127060
Ensembl:
ENSCING00000007703
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MVKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEALEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETIRYYITVIDAPGHRDFIKNMITGTSQADCAILIVAAST
GEFEAGVSKNGQTREHALLAYTLGVKQLIVAVNKIDNTEPPYSEDRFTEISKEVSDYVKK
VGYNPKAVPILPVSGFHGDNMLEKSENMPWFKGWKKTLKENNSVINQSGVTLFEALDAIR
PPLRPIGKPLRLPLQDVYKISGIGTVPVGRVETGVLKPGMVVTFAPNNITTEVKSVEMHH
EELKEALPGDNVGFNVKNVSVKDIKRGMVVGNSKTDPPLAASNFLAQAIVLNHPSEIHVG
YAPVLDCHTAHVACKFSELKQKIDRRSGKVLEENPKMVKTGDAAMIVLTPSKPMCVEAFV
DYPPLGRFAVRDMRQTVAVGVIKSVNKAQPSAGKVTKSAQKAVKKK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaaaaacttcatatcaacattgtagtgataggccacgtcgactccggaaag
tcaacgaccactggtcatctaatctacaaatgtgggggcatcgataaaagagcgatcgag
aaattcgaaaaagaagcgttagagatgggtaaaggctcgttcaagtatgcctgggtgttg
gacaaactgaaagcggaacgagaaagaggaatcacaattgatattgcactttggaagttt
gaaacaattaggtattatatcacggttattgatgcacctggtcaccgagatttcatcaaa
aacatgattactggaacatcccaggctgattgcgcaattttaattgttgcagcaagtaca
ggggaatttgaagcaggggtatcaaagaacggccaaacaagggagcacgctctccttgca
tacacacttggtgtgaaacaactgattgtagcagttaacaagatagataacactgaacct
ccgtattctgaggataggtttaccgaaatcagcaaggaagtttccgattacgttaaaaag
gttggatacaatccaaaagcggttccaattcttccggtttctggttttcatggagacaac
atgttggaaaaatcagaaaatatgccgtggtttaaaggatggaaaaagacgttaaaggaa
aataattcggtcatcaaccaatccggggttacactatttgaggctctggatgcaattcgg
ccacccttgagacctattggtaaaccacttcggcttcccctacaagatgtctacaaaatt
agcggcatagggacggttccagttggtcgagtggagactggtgttcttaaaccaggtatg
gtggttacttttgccccgaacaacattacaacagaagtcaagtccgttgaaatgcaccac
gaagaactaaaggaagcacttccgggagacaacgttggtttcaacgttaagaacgtgtcg
gttaaagatataaaacggggtatggtcgttggaaactccaaaacggaccctccattagca
gccagtaacttcttagcacaggccatagtacttaaccatccgagcgagattcatgtaggc
tatgcccccgtgctggactgccacacagctcacgttgcttgcaagtttagtgagttgaag
caaaaaatcgatcgccggtcaggaaaggtactggaagaaaatccaaagatggtaaaaaca
ggtgatgcagctatgatagtgctgacgccgagcaagcctatgtgcgtagaagcgttcgtt
gactaccctcctcttggtcgatttgctgttcgagatatgagacaaactgtggcagttggg
gtgattaaaagtgtcaataaagcgcagcccagtgccggaaaagtaacaaaatctgcacaa
aaagcggttaagaagaaatag
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