Ciona intestinalis (yellow sea squirt): 100177132
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Entry
100177132 CDS
T01056
Name
(RefSeq) intraflagellar transport protein 56-like
KO
K19685
intraflagellar transport protein 56
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100177132
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100177132
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GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_12
TPR_9
Motif
Other DBs
NCBI-GeneID:
100177132
NCBI-ProteinID:
XP_002130244
Ensembl:
ENSCING00000009023
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Position
3:complement(4902205..4907015)
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AA seq
556 aa
AA seq
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MILSRQKPAVGGASALVREKEKSKEKKLPKVDDLLTSRDYTGAMTVLEFNKQAGKGEKDT
DSWIGFCAFHLGDYKKAYEMYMNLCKQPGCDANMWLNFSCCCFYLGMYKEAEDAALKAPK
SSLQNRLLFHLSHKFNDEKRLMTFHKNLQDQFEDQLCLASIHYMRSHYQESIDVYKRILL
ENREFLALNVYVALCYYKLDYYDVSQEVLAVYLQSYPDSAIAVNLKACNHFKLFNGKAAE
AELKHLQEISSSSFSFASELVKHNLVVFRSGEGALQVLPPLIDVIPEARLNLVIYYLRQD
DLDEAYGLIKETDPTSPQEYIIKAVVNAALGQERGSREHVKIAQQYFQMFGSSASECDTI
PGRQCMASCFFLLKQFDDVLIYLNSIKSYFYNDDVFNFNYAQAKATTGNFKEAEEVFLLV
QSEKIKNDYVYLSWLARSYIMNKKARLAWELYLKMETSGESFSLLQMIANDCYKMGQFYI
SAKAFDVLERLDPNPEYWEGKRGACVGLFQLIIAGQEPRETLREVLMLLRNSTNPQVEYI
ARVIKKWGKENRVAVQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtctcgacaaaaaccagcagttggtggagcatctgctttggttcgtgaaaag
gagaaaagcaaagaaaagaagttgccaaaagttgatgatctgttgacttctcgagattac
actggtgctatgacagtgttggagttcaataagcaagctggaaaaggagaaaaggacact
gactcctggattggtttttgtgcttttcatttgggagattataagaaagcgtatgagatg
tatatgaacttgtgcaaacagcctggatgtgatgcaaatatgtggcttaacttctcatgt
tgctgcttctaccttggaatgtacaaggaagctgaagatgctgcactgaaggcacccaag
tcatccctacagaatcgactcttgtttcacttgtcgcacaaatttaatgatgaaaaaaga
ttgatgacatttcacaaaaacctacaagatcagtttgaggaccagctatgccttgcttcc
atacattacatgagatctcattaccaagaatcaattgatgtgtacaaaagaatactgctt
gaaaacagggagttcttggctttaaatgtttatgttgctttgtgctactacaaacttgat
tactatgatgtctcacaggaagtattggccgtgtaccttcaatcctaccctgatagtgca
atagcagttaacttaaaagcttgcaaccatttcaaacttttcaatggaaaagctgctgaa
gctgaattgaaacatctgcaagaaatatcatcttcctcattcagttttgcatctgaactt
gtcaagcataacctggttgtgtttcgaagtggagagggagcattacaagtgttgcctcca
ttgatagatgttataccagaagcaaggcttaatttggtcatctattacttgagacaggat
gacttggatgaagcttatgggcttattaaggagacggatcccactagtccacaggaatac
atcatcaaagctgtagtgaatgctgctttaggacaagaaagaggctcgagagaacacgtc
aagattgctcaacaatatttccaaatgtttggaagctcggcgagtgaatgcgatacaatt
cctggtcgacagtgtatggcgtcttgtttcttcttactgaaacagtttgatgatgtgttg
atatacctcaactccattaagtcttacttttacaacgatgatgttttcaacttcaactac
gctcaagcaaaagcaacaactggtaacttcaaagaggcagaagaggtgtttcttctggta
caaagtgaaaagatcaaaaacgactatgtttacttgagttggcttgcaagaagttatata
atgaacaagaaagcaaggcttgcttgggaactttacttaaaaatggaaacatcaggagaa
tccttcagtttgttgcagatgattgctaacgactgttacaagatgggtcagttctacatc
tcagcaaaagcctttgatgttttggagcgattggatccaaaccctgaatactgggagggt
aaaagaggggcttgtgttggtctgtttcaactaattattgcggggcaggaaccaagggaa
acattacgtgaagttctaatgctgcttcgtaactcaactaacccacaagtcgaatacatc
gcgcgtgttattaagaaatggggaaaagagaacagagtagctgtgcagtga
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