KEGG   Ciona intestinalis (yellow sea squirt): 100177137
Entry
100177137         CDS       T01056                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF3
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cin01009]
    100177137
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cin04121]
    100177137
Enzymes [BR:cin01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100177137
Protein phosphatases and associated proteins [BR:cin01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100177137
Ubiquitin system [BR:cin04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100177137
SSDB
Motif
Pfam: SH3_1 SH3_2 SH3_9 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 zf-RING_11 zf-RING_4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 100177137
NCBI-ProteinID: XP_002123694
LinkDB
Position
14:complement(119531..131057)
AA seq 621 aa
MNSEFINDLLECSVCLKPLDQQNKVLPCQHTFCKSCLFSIVRSHKELRCPECRVLVKQKV
DDLPANILLIRLLDGIKSQESNKPQQPAEKTEFRRHSVEGILTSSIPASGGAKDGGNGEG
GRISTRRNNRHTVHERSGSEPHTTSGLQIPTQSRPHARAIHNYDSQVPSDLSFKKGDLIM
LIKKIDENWTSGECHGKMGVFPTNYVEIIHPLPTERPYCFALYDFESSDAEKDRDCLTFS
KNEKILVIRRVDENWVEGMLRDKIGIFPLSFVKLSEEARKLFEDLHISDPHPGSKNDGDG
KDKGTLGAAARKILSSKPGYKSNKKRHSFPTFQAAKASGEAVPPTTYRHSMELGASASIP
TSKHGTTSNTNPTVDSDFQNPTNPSQTSRVDNTVRGGGGEINIASSPTSIKMPMRVSSNV
HILQCRTGNGDHGKPTERSPRASIPLPSSGKIVTASYSYHAEKPDELELLKGESYQITEI
CNDGWCRGVHIKSGKSGVFPGNYVASNIKSQPTQSTKPDNSTPNNPTMTQDQQGSSKHPP
PRPKVPPIKIPTSNGGSRAESSSSSEPSSSRGIRSPTSTRQHPMKKVPVQGKKDKSSNLL
LKMIGGGKKSRSSSLPTTPAR
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgaattctgagtttattaatgatttattggaatgttctgtctgtttgaaaccgctggat
caacagaataaggtcctcccatgtcaacatacgttctgtaaatcttgtcttttttccatt
gtgcgctcacacaaggagttgcgttgtcctgagtgtcgggtcctcgttaaacaaaaagtt
gacgatctcccggcaaacattctcctcattcgtttattagacggaatcaaatcacaagaa
tctaacaaaccacagcaacccgctgaaaaaacggagtttcgtcgacattcggttgaaggt
atactaacctcctccatacccgcaagtggtggggcaaaggatggtggtaatggggagggg
gggaggataagtacaaggaggaacaacagacataccgtgcatgagcgatctggtagtgaa
cctcacactacaagtggtttgcagattcccacacaaagccgacctcatgcaagagcaata
cacaactatgattcccaagtaccaagtgatctttcatttaagaaaggtgacctaataatg
ttgattaagaagatagatgaaaactggacgagtggggaatgccatgggaagatgggagta
tttccaactaattatgtggagataatccaccctttacccaccgagagaccttattgtttt
gctttgtatgattttgaatcgagcgatgcagagaaagatagagactgtctcactttttca
aagaacgaaaagatcctggtaatacgaagagttgatgagaattgggttgaaggaatgttg
agagataagattgggatatttcctctatcttttgttaagttaagtgaggaagctcgtaag
ttgttcgaagatctccacatctcggatccgcatcctgggagcaagaacgatggtgatggt
aaagataaaggaacattgggagcagcagcacggaagatcttaagtagcaaacctggatat
aaaagtaacaagaaacgacattcgtttccaacatttcaagcagctaaagcatcgggtgaa
gccgtacctcccaccacatacagacattccatggagttaggagcatcagcaagtattcca
acttctaaacatggaacaacatctaatacaaatccaacagtggattcagatttccaaaat
ccaacaaatccaagtcagacttcccgtgttgataatactgtgagggggggtggtggtgaa
ataaacatagcaagctctcctacaagtataaagatgccgatgagggtttcttccaatgtt
catatactacagtgtcgtactggtaacggtgatcatggtaaaccaactgaacgatcgcca
cgtgcgtcaattccgttaccaagctctgggaaaatagtgacagcttcatactcgtaccat
gctgagaaacccgatgaattagaattattgaagggtgaaagttatcaaataactgagata
tgcaacgatggctggtgtagaggggttcatatcaagagtggaaagtctggtgtttttccc
ggcaattatgtggcaagcaatataaaaagccaaccaacccaatcaaccaaacctgacaac
tcaacaccaaacaacccaaccatgacacaggatcaacaaggatcatccaaacatccgcct
ccacgacctaaggttcctcccattaagatcccaacatctaatggaggatcaagagcagag
tcatcctcttcatcagaaccttcatcatcacgtggtatacgtagcccaacatcaacacgt
cagcatcccatgaagaaagttccggttcaaggtaaaaaggataagagcagcaacctcctg
ttgaagatgattggaggaggaaagaagtcccgatcgtcatctttacctacaactcctgca
aggtga

DBGET integrated database retrieval system