KEGG   Ciona intestinalis (yellow sea squirt): 100177148
Entry
100177148         CDS       T01056                                 
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit I-like
  KO
K03246  translation initiation factor 3 subunit I
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:cin03012]
    100177148
Translation factors [BR:cin03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    100177148
SSDB
Motif
Pfam: EIF3I WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_NWD2_C Beta-prop_WDR35_2nd WD40_like
Other DBs
NCBI-GeneID: 100177148
NCBI-ProteinID: XP_002122597
Ensembl: ENSCING00000003743
LinkDB
Position
7:5841406..5845427
AA seq 325 aa
MRPLMLQGHERAITQIRYNREGDLLFTVAKDATPNVWYTINGERLGTYDGHRGTVWSVDV
NWDSTKVLTGAADLSCKLWDCETGKVINTWDTKSSVRSSNFSYCGNMINFTTDRQMKHEP
KICIYDIREPSDSEPALSFVIDTKEMSKPMCSLWGALNEYLITGHDDGTMAHWDLKTGEL
LHSVREHTALIKDMQLSSDQMMLITASKDKTAKLFDAPSLNLMKTYKTDRPVNSAAISPI
RDHVVLGGGQEAMDVTTSNLKEGKFDARFFHLVFEEEFGRVKGHFGPINSLAFHPNGNSY
SSGGEDGFVRVHQFDESYFDFQFEC
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagaccgttaatgttacaaggccatgagcgagcgatcactcagattcgatacaacagg
gaaggcgacttgttgtttactgtagctaaagatgccacacccaacgtatggtacactatt
aatggggaaagattaggtacatacgacggccacagaggaactgtctggtcggttgacgtg
aactgggattcaacgaaagttttaacgggagcggccgatttgtcgtgtaaattgtgggat
tgcgaaacaggcaaggtaatcaacacatgggacacaaaatcttcggtccgtagttccaac
ttcagctactgtggaaacatgatcaacttcaccactgatcgacagatgaaacatgaacct
aagatatgtatctatgacatcagagaaccaagtgacagtgaacccgcgctaagctttgta
atcgacacgaaggaaatgtcgaaaccgatgtgttcattgtggggagcgttaaacgagtat
ctgatcactgggcacgatgatgggacgatggctcattgggatcttaagacaggggagttg
ctacacagcgtacgtgaacacacagcgttgatcaaggacatgcagttaagctccgatcaa
atgatgttgatcaccgcaagcaaagataaaacagccaagttattcgacgccccttccctt
aatttgatgaaaacttacaaaaccgatcgccccgttaactcagctgccatatctcctata
agggaccatgttgtgcttggcggtgggcaggaggcaatggacgtaacgacatcaaacttg
aaagaaggaaagttcgatgctcgcttcttccacctagtgttcgaggaggagttcgggagg
gtcaagggtcattttggaccaatcaacagtctcgcatttcaccccaacggaaacagttac
tcgagtgggggggaagatggttttgttcgcgttcatcaattcgatgagtcatacttcgac
tttcagttcgaatgctga

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