Ciona intestinalis (yellow sea squirt): 100177157
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Entry
100177157 CDS
T01056
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 7
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03083
Polycomb repressive complex
cin04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100177157
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100177157
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cin01002
]
100177157
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100177157
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100177157
Peptidases and inhibitors [BR:
cin01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100177157
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100177157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP7_ICP0_bdg
USP7_C2
UCH_1
MATH
Motif
Other DBs
NCBI-GeneID:
100177157
NCBI-ProteinID:
XP_004225844
Ensembl:
ENSCING00000004226
LinkDB
All DBs
Position
3:4438688..4450620
Genome browser
AA seq
1088 aa
AA seq
DB search
MEEGNTPMPDTTTLHNTPQHQGGNPDAMETEDSPAINDASMVNGDASENDDAKSDEIAEE
DDEFGFYRSQATFSFTVDNINKLVESTTSPPTYVRGLPWRILVMPRTIHDRSAGKSLGYF
LQCNAENESTLWSCHGSAALRILPAKDGVEMLDKKIEHMFYCKENDWGFSTFLPWADLVN
PEKGYITPDKKVTFQVHVYADAPHGLAWDSRKLTGYIGLKNQGATCYMNSLLQTLFFTNK
LRKAVYMMPTESDDSMKSVSLALQRVFYELQSSDKPVATKKLTKSFGWETFDSFMQHDVQ
ELCRVLLDNVELKMKGTCVEGTIPDILEGKFKSYVKCKHVDYVSSREESFFDIQLIVKGN
KNVMESFRNYVKPDTLDGDNKFDAGDFGMQEAEKGIIFKHFPAVLHLQLLRFQYDAATDM
YVKTNDRYEFPEVLHLDEFLEKPDRNDSAVYILHAILVHSGDNHGGHYVAYLNPKGDGKW
CKFDDDVVSRCTKKEAFLGSYGGVGEESYVARNSTNAYMLVYIRKSKLNDVLCPVTDADI
PEQLMERLNEERQLEAFRRKEKAEMHLYLSVNLVTEDMFCGHQAEDLFDFERSHFTRHIK
ILRQASFDDLLNLISQGIGYSKNQFRLWLFSQRPNNSWRPTLLETGETVGKHLIEVAENE
NPWHLWLETIQPDSTEDTLPAFDKQGDILVFLKMYTPSTRTISYCGHVSVPIEGTSVVAM
EKTLRKRGGLPPNTPLLLFEEISASELRPIHDRNLQFGEVMDKLMDGNIIVFQPVEPSCP
DAARYFLDVFFRVDVILCDKNDPLDPGFTVSLNRNWTYGQFAEKVAERLDTDPMMLQFFR
VQNVRDQPGNVIRSSFDGQLKDLLQIYGTRKPSKRLYYQQLTMKVNEFENKRQFRCMFVW
PNLKEEEIVLYPNKTSCVAGLLEECRKKFAIDSSKELRVLEVVGNKICGILRPEKALEDL
TPYGQVARLYRIEIVPDDQKEISDEEVLICASHFHKEIYNTFGVPLLIKVRTGERFSEIR
ERIQKAMEIPDNVFEKYKIAVVVAGQVKYMSEDMHMMMNLKDVMPTMTACYSEFKVMCKG
LDRTGPFK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggtaacacaccaatgcctgacacaacaactttgcataacaccccacagcat
cagggtggcaacccagatgcaatggagacagaggatagtcctgcaatcaatgatgcaagt
atggtgaatggagacgcttcggaaaacgatgatgcaaagtcggatgaaatagcggaggaa
gacgatgagtttggtttctatcgttcgcaggctacattcagttttacagtagataacata
aacaaactggttgaatcaacgactagtccaccaacctatgttcgtggtctgccttggcgt
attctggtgatgccacgtacaatacatgatcgctctgccggcaagagtcttggatacttt
ttgcagtgcaatgcagagaacgaatcaacgttatggtcttgccacggctcagctgctctg
cggattttgccagctaaggacggagtggaaatgctggataaaaagattgaacacatgttt
tactgcaaggaaaatgactggggcttcagtacgtttcttccctgggccgatttagtaaac
cctgaaaagggttacattacgcctgataaaaaagtaacatttcaagttcatgtttatgcc
gatgcccctcatggtctggcttgggacagtcgcaaattgacgggatatatcggactaaaa
aatcagggagccacttgttacatgaacagtttactccagactttgtttttcaccaacaag
ttacgcaaagctgtgtacatgatgccaaccgagagcgatgactcgatgaagagtgtctca
ctggcgctacaacgagttttctatgaactacagtcaagtgacaagcctgtagcgaccaaa
aaattaacgaaatcctttggttgggaaaccttcgattctttcatgcagcatgatgtccag
gagttgtgcagagtacttcttgacaatgtagagctaaagatgaaaggaacatgcgtggaa
ggtaccatcccagatattctggagggcaagttcaagtcctatgtgaagtgcaagcatgtg
gactacgtctcgagccgtgaagaatctttctttgacatccagcttattgttaaaggaaac
aaaaacgtgatggagtctttcagaaactatgtaaagcctgatacattggatggtgacaac
aaattcgatgccggagactttgggatgcaggaggcggaaaaagggatcatcttcaagcac
ttccccgctgttttacatctccagttgctgcgatttcagtatgatgcagcaacggatatg
tatgttaaaacaaacgaccgatatgagttcccagaagttcttcatcttgatgagttcctt
gaaaaacctgacagaaatgattccgctgtttatattttacatgcaatccttgttcacagt
ggagacaaccatggtgggcattacgttgcgtatttaaacccaaaaggggatggaaagtgg
tgtaagttcgatgacgatgtagtttctcgttgcactaaaaaagaagctttccttggcagt
tatggaggggttggtgaagaatcctacgtggcaagaaattcaacaaacgcgtacatgttg
gtttatattcgtaaaagtaaactgaatgacgtgttgtgcccggtcactgacgctgacatc
cctgaacaactcatggaaagattgaacgaggaacgccagcttgaagcattcaggagaaaa
gagaaagctgagatgcatctctatctatctgttaatcttgtcactgaagatatgttctgt
ggtcaccaggctgaagatcttttcgattttgagcgttctcacttcacaaggcacatcaag
atattgagacaagcttcttttgatgacctactcaaccttatatcacaaggcatcggatat
tcaaagaatcagttccgtttgtggttgttcagtcaacgacccaacaattcatggagacct
accttgttagagacgggagagactgtgggaaaacatttgatcgaagtcgctgaaaatgaa
aatccatggcatttgtggttggagacgatccaacccgacagtacagaagacacattacca
gcatttgataaacaaggtgacatcttggtgttcctgaagatgtacacaccaagcacacga
acaatctcttactgtggacatgtgtcagtgcccatagaaggcacctcggtggtagcaatg
gaaaaaactcttcgcaaacgtggtggcttgccacctaatacacctctgctgctatttgag
gagatcagtgcatcggagctccgacctatccatgatcgcaacctccagttcggtgaagtg
atggataaacttatggatggaaatatcatcgtcttccaaccggtcgagccttcatgtccg
gatgccgctagatacttcctggatgttttcttcagagttgatgtgatcctctgtgataag
aatgatcctcttgatcccggcttcactgtgtctcttaatcggaactggacatacggacaa
tttgcagagaaggttgctgaaaggttggacacagatccaatgatgcttcagttcttcaga
gtccagaatgtccgggatcagccaggcaatgttataaggtcaagtttcgatggccagctt
aaggatttgcttcagatctatgggaccaggaagccatccaagagactttactaccaacag
ttaacaatgaaagttaacgagtttgaaaacaaacgtcaattccggtgtatgtttgtatgg
cctaacctaaaggaggaggaaatcgtgttatatccgaataagacaagctgtgttgctggt
ctgctagaagaatgtaggaaaaagtttgcgattgatagcagcaaggagcttcgtgtgcta
gaagttgtaggtaataagatttgtggaattctgcgaccggaaaaagcccttgaggatttg
acaccgtatggtcaagtagccaggttgtacaggatagagattgtgcctgatgatcaaaag
gagataagtgatgaggaggttctgatctgtgcaagccatttccacaaggaaatctacaac
acctttggtgttcctctcctcataaaagtaaggacaggagaacggttttctgagattcgg
gaacgcattcagaaagcaatggaaattcctgacaatgtgtttgaaaaatacaaaatagct
gtggtagttgcaggacaggtaaagtacatgtccgaagatatgcacatgatgatgaacttg
aaagatgttatgcccacaatgaccgcttgctactcagagttcaaagttatgtgcaaaggc
ttggataggactggaccatttaaataa
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integrated database retrieval system
